# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1bssA	244	4.632	c.52.1.2	33256
1z63A	500	10.25	c.37.1.19,c.37.1.19	124502,124503
1wftA	123	13.26	b.1.2.1	114592
2pn8A	211	18.62		
1sx5A	244	21.17	c.52.1.2	99023
1vqvA	306	22.24	d.79.4.1,d.139.1.1	114024,114025
1ukuA	102	30.93	d.58.5.2	99533
2egzA	219	31.34		
1p1lA	102	36.02	d.58.5.2	87695
1kr4A	125	36.22	d.58.5.2	72889
2c34A	116	37.20	b.1.26.1	129710
2pfmA	444	40.74		
2rkvA	451	41.72		
2o02A	230	47.16		
1v8fA	276	53.74	c.26.1.4	100503
1x1eA	239	55.71		
1abrB	267	56.75	b.42.2.1,b.42.2.1	25563,25564
1naqA	112	57.28	d.58.5.2	91761
1i36A	264	57.88	a.100.1.8,c.2.1.6	71108,71109
3cwiA	78	59.27		
1so7A	382	62.49	b.68.1.1	112106
1dtwB	342	62.73	c.36.1.7,c.48.1.2	31828,33102
1oxnA	140	64.61	g.52.1.1	93704
2q3bA	313	65.98		
1lbd	282	67.48		
1jd5A	124	68.46	g.52.1.1	66544
2gi3A	476	70.88	c.117.1.1	135220
2uwgA	171	72.74		
2aaiB	262	80.02	b.42.2.1,b.42.2.1	25561,25562
1dxeA	256	81.06	c.1.12.5	29310
1pzgA	331	83.77	c.2.1.5,d.162.1.1	95425,95426
2dwkA	180	86.01		
1b97A	244	87.37	c.52.1.2	33252
1yb4A	295	88.18		
2pytA	133	89.18