# List of top-scoring protein chains for t2k-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1bssA	244	4.209	c.52.1.2	33256
1wftA	123	12.44	b.1.2.1	114592
1ukuA	102	14.77	d.58.5.2	99533
1kr4A	125	16.82	d.58.5.2	72889
1p1lA	102	18.56	d.58.5.2	87695
1sx5A	244	19.33	c.52.1.2	99023
1z63A	500	20.91	c.37.1.19,c.37.1.19	124502,124503
2pn8A	211	24.69		
1vqvA	306	27.55	d.79.4.1,d.139.1.1	114024,114025
2c34A	116	29.16	b.1.26.1	129710
2egzA	219	37.51		
1naqA	112	38.20	d.58.5.2	91761
2rkvA	451	40.17		
1v8fA	276	40.24	c.26.1.4	100503
2o02A	230	44.34		
2pfmA	444	46.31		
1x1eA	239	46.55		
1abrB	267	50.80	b.42.2.1,b.42.2.1	25563,25564
2gi3A	476	64.50	c.117.1.1	135220
1yb4A	295	70.67		
2q3bA	313	74.38		
1i36A	264	75.21	a.100.1.8,c.2.1.6	71108,71109
1pzgA	331	77.29	c.2.1.5,d.162.1.1	95425,95426
2uwgA	171	77.61		
2f3nA	76	79.40	a.60.1.2	132885
1b97A	244	80.46	c.52.1.2	33252
1nzaA	103	81.25	d.58.5.2	86444
1so7A	382	81.30	b.68.1.1	112106
2dwkA	180	83.04		
2z0lA	318	87.93		
2fz4A	237	89.74	c.37.1.19	134419