# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1bssA	244	5.948	c.52.1.2	33256
1wftA	123	23.78	b.1.2.1	114592
1sx5A	244	25.05	c.52.1.2	99023
1so7A	382	34.22	b.68.1.1	112106
1ukuA	102	48.06	d.58.5.2	99533
1b97A	244	50.15	c.52.1.2	33252
1i36A	264	56.34	a.100.1.8,c.2.1.6	71108,71109
1eonA	245	62.41	c.52.1.2	33238
1kr4A	125	67.56	d.58.5.2	72889
2pfmA	444	67.89		
1abrB	267	68.06	b.42.2.1,b.42.2.1	25563,25564
1z63A	500	70.09	c.37.1.19,c.37.1.19	124502,124503
1dxeA	256	73.28	c.1.12.5	29310
1p1lA	102	75.76	d.58.5.2	87695
2pn8A	211	76.23		
1b96A	244	76.87	c.52.1.2	33268
2aaiB	262	78.20	b.42.2.1,b.42.2.1	25561,25562
3bs7A	78	82.77		
1b94A	244	84.78	c.52.1.2	33250
1naqA	112	86.62	d.58.5.2	91761
2fz4A	237	88.53	c.37.1.19	134419