# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1bssA	244	2.122	c.52.1.2	33256
1wftA	123	7.767	b.1.2.1	114592
1sx5A	244	14.46	c.52.1.2	99023
1so7A	382	25.09	b.68.1.1	112106
2pn8A	211	29.53		
1oxnA	140	31.59	g.52.1.1	93704
1a59A	378	37.15	a.103.1.1	18902
3d9tA	97	38.90		
1kl9A	182	41.10	a.60.14.1,b.40.4.5	111574,111575
1b97A	244	44.73	c.52.1.2	33252
1jd5A	124	51.77	g.52.1.1	66544
1abrB	267	53.16	b.42.2.1,b.42.2.1	25563,25564
2q3bA	313	54.00		
2vm5A	106	61.43		
1bccD	241	61.80	a.3.1.3,f.23.11.1	15959,43698
1ug1A	92	64.72	b.34.2.1	99360
1b94A	244	68.26	c.52.1.2	33250
1b96A	244	71.14	c.52.1.2	33268
1tahA	318	71.90	c.69.1.18	34775
1f9xA	120	74.12	g.52.1.1	59748
2mnr	357	75.18		
1eonA	245	75.19	c.52.1.2	33238
1i36A	264	75.59	a.100.1.8,c.2.1.6	71108,71109
1ppjD	241	81.74	a.3.1.3,f.23.11.1	104258,104259
2aaiB	262	87.31	b.42.2.1,b.42.2.1	25561,25562
3cwiA	78	89.12