# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1jlyA	304	6.917	b.42.3.1,b.42.3.1	25587,25588
2ielA	138	7.857		
2dc0A	434	10.97		
2p5xA	230	13.40		
1nh1A	330	15.52	e.45.1.1	91871
2odjA	428	16.81		
2dg6A	222	20.20		
1yh3A	256	26.37		
1onrA	316	27.20	c.1.10.1	29169
1u02A	239	29.85	c.108.1.15	107538
1vcvA	226	38.34	c.1.10.1	119988
3crjA	199	40.06		
2g5xA	234	40.88		
2av4A	162	42.45		
2i66A	262	42.94		
2obbA	142	44.40		
1kcmA	270	48.12	d.129.3.4	72300
1mhmA	288	53.65		
2qy0A	159	54.77		
1qgvA	142	56.05	c.47.1.8	33056
1y8qA	346	56.83		
1vj1A	363	57.36	b.35.1.2,c.2.1.1	100794,100795
1dlyA	164	61.60	a.1.1.1	14983
2hxjA	144	61.96		
1eziA	228	63.25	c.68.1.13	34512
2hoxA	427	64.11	c.67.1.1	136644
1iz0A	302	65.06	b.35.1.2,c.2.1.1	83821,83822
2jx9A	106	65.69		
1am2	199	66.08		
1ygaA	342	66.87		
2p58A	65	69.81		
2j3mA	572	70.58		
2o3sA	262	73.47		
2qvbA	297	78.14		
3ciwA	348	79.59		
1tr0A	108	79.80	d.58.4.4	107261
1zsyA	357	81.72		
1agjA	242	85.81	b.47.1.1	25827
1oj4A	283	88.84	d.14.1.5,d.58.26.5	93083,93084
2itmA	484	89.29