Best Alignments for T0499

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2igdA	2.8424e-13	2igdA/T0499-2igdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
2igd	2.8963e-13	2igd/T0499-2igd-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qmtA	4.0505e-13	2qmtA/T0499-2qmtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2on8A	6.3318e-13	2on8A/T0499-2on8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gi9A	8.5391e-13	2gi9A/T0499-2gi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mhxA	4.5115e-02	1mhxA/T0499-1mhxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
1mi0A	7.5578e-02	1mi0A/T0499-1mi0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
1pgx	9.2724e-02	1pgx/T0499-1pgx-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b7eA	1.2197e+00	2b7eA/T0499-2b7eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ql3A	4.9816e+01	1ql3A/T0499-1ql3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
2qsbA	5.7818e+01	2qsbA/T0499-2qsbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1krnA	6.2002e+01	1krnA/T0499-1krnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1
2q00A	6.2460e+01	2q00A/T0499-2q00A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qzgA	6.2537e+01	2qzgA/T0499-2qzgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qklA	7.0796e+01	2qklA/T0499-2qklA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f6eA	7.2439e+01	2f6eA/T0499-2f6eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vf8A	7.4179e+01	1vf8A/T0499-1vf8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.8.5 d.26.3.1
3cjsA	7.4186e+01	3cjsA/T0499-3cjsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i71A	8.0342e+01	1i71A/T0499-1i71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1
5hpgA	8.3463e+01	5hpgA/T0499-5hpgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001