# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2on8A	56	1.70e-11		
2gi9A	56	1.79e-11		
2qmtA	56	1.79e-11		
1mhxA	65	1.81e-11	d.15.7.1	79134
1mi0A	65	1.84e-11	d.15.7.1	79135
2igd	61	1.86e-11		
1pgx	83	1.86e-11		
2igdA	61	2.05e-11	d.15.7.1	37821
2b7eA	59	3.169		
2qsbA	89	17.73		
2qzgA	94	20.42		
1ql3A	99	24.02	a.3.1.1	15822
1b2iA	83	26.66	g.14.1.1	44640
1uzcA	71	31.36	a.159.2.1	100222
1bwwA	109	31.36	b.1.1.1	20518
1h8gA	95	35.12	b.109.1.1	65735
1eeuA	114	37.94	b.1.1.1	20546
1co6A	107	38.88	a.3.1.1	15894
1i71A	83	42.37	g.14.1.1	61864
3cjsA	60	45.28		
1eeqA	114	45.39	b.1.1.1	20544
1i8kA	107	52.68	b.1.1.1	71130
1qfwM	108	53.77	b.1.1.1	20436
2f6eA	127	54.33		
1krnA	88	55.23	g.14.1.1	44629
1cd8	114	58.13		
1pmlA	86	60.91	g.14.1.1	44632
2f15A	96	64.71		
1iznB	277	70.57	e.43.1.2	83848
1a2yA	107	70.90	b.1.1.1	19926
1ki0A	253	71.34	g.14.1.1,g.14.1.1,g.14.1.1	72493,72494,72495
1a7nL	107	71.68	b.1.1.1	19940
1j1xL	107	72.17	b.1.1.1	77064
1gvmA	136	73.43	b.109.1.1	70612
2hy5B	136	73.71	c.114.1.1	136866
2hu9A	130	74.79		
1g7jA	107	76.61	b.1.1.1	19932
2v05A	311	77.09		
2nx9A	464	82.49		
2jh1A	246	88.29		
1wz4A	23	89.25