# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2on8A	56	8.14e-11		
1mhxA	65	8.22e-11	d.15.7.1	79134
1pgx	83	8.37e-11		
2gi9A	56	8.37e-11		
1mi0A	65	8.62e-11	d.15.7.1	79135
2igd	61	9.05e-11		
2qmtA	56	9.60e-11		
2igdA	61	9.82e-11	d.15.7.1	37821
2b7eA	59	1.592		
1uzcA	71	20.43	a.159.2.1	100222
2qsbA	89	21.19		
1b2iA	83	21.55	g.14.1.1	44640
2qzgA	94	22.19		
2f15A	96	24.95		
1ql3A	99	26.67	a.3.1.1	15822
1h8gA	95	28.93	b.109.1.1	65735
3cjsA	60	29.01		
1krnA	88	35.95	g.14.1.1	44629
1pmlA	86	40.84	g.14.1.1	44632
2f6eA	127	42.52		
1co6A	107	43.83	a.3.1.1	15894
1i71A	83	51.39	g.14.1.1	61864
1bwwA	109	52.61	b.1.1.1	20518
2i7hA	189	53.85		
2v05A	311	54.52		
1z0nA	96	54.52		
1eeuA	114	57.06	b.1.1.1	20546
2jh1A	246	59.89		
1gvmA	136	60.85	b.109.1.1	70612
1eeqA	114	67.98	b.1.1.1	20544
1iznB	277	68.33	e.43.1.2	83848
1qfwM	108	68.59	b.1.1.1	20436
2nx9A	464	72.03		
1f5vA	240	74.72	d.90.1.1	40255
1xg0A	76	76.63	d.184.1.1	115273
3bm1A	183	80.95		
2pwwA	127	81.10		
2jesA	503	82.41		
1xviA	275	86.75	c.108.1.10	116088