# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2gi9A	56	2.81e-09		
2qmtA	56	2.99e-09		
1pgx	83	3.01e-09		
2igd	61	3.16e-09		
2on8A	56	3.22e-09		
2igdA	61	3.44e-09	d.15.7.1	37821
1mhxA	65	3.61e-09	d.15.7.1	79134
1mi0A	65	3.85e-09	d.15.7.1	79135
2b7eA	59	9.780		
1ab5A	125	21.58	c.23.1.1	31056
2qsbA	89	23.50		
1eeqA	114	26.05	b.1.1.1	20544
2ppwA	216	27.18		
2qzgA	94	28.30		
1eeuA	114	29.09	b.1.1.1	20546
1ab6A	125	40.82	c.23.1.1	31054
1bwwA	109	50.40	b.1.1.1	20518
1e6mA	128	50.52	c.23.1.1	31039
2cwlA	302	51.28	a.25.1.3	130927
1z1dA	103	54.28	a.4.5.16	124351
1uzcA	71	55.58	a.159.2.1	100222
2jc5A	259	62.96		
1s8nA	205	63.41	c.23.1.1	105374
1i8kA	107	64.06	b.1.1.1	71130
1dlfL	113	64.96	b.1.1.1	20382
1b2iA	83	70.13	g.14.1.1	44640
1qfwM	108	70.20	b.1.1.1	20436
1gq8A	319	76.52	b.80.1.5	70350
1ppjB	439	83.08	d.185.1.1,d.185.1.1	104254,104255
1u0sY	118	84.97	c.23.1.1	107566