Best Alignments for T0499

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2igd	3.7970e-13	2igd/T0499-2igd-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2igdA	4.9647e-13	2igdA/T0499-2igdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
2qmtA	9.8510e-13	2qmtA/T0499-2qmtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2on8A	1.3575e-12	2on8A/T0499-2on8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gi9A	2.2977e-12	2gi9A/T0499-2gi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b7eA	9.8296e-01	2b7eA/T0499-2b7eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vf8A	3.2190e+01	1vf8A/T0499-1vf8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.8.5 d.26.3.1
1ql3A	4.2657e+01	1ql3A/T0499-1ql3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
2q00A	4.5659e+01	2q00A/T0499-2q00A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1krnA	5.1967e+01	1krnA/T0499-1krnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1
1iktA	5.2120e+01	1iktA/T0499-1iktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.106.1.1
2qklA	5.9812e+01	2qklA/T0499-2qklA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
5hpgA	5.9929e+01	5hpgA/T0499-5hpgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1
2qsbA	6.0386e+01	2qsbA/T0499-2qsbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2v05A	6.2254e+01	2v05A/T0499-2v05A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qzgA	6.3553e+01	2qzgA/T0499-2qzgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fioA	6.6156e+01	1fioA/T0499-1fioA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.47.2.1
1eeuA	6.7875e+01	1eeuA/T0499-1eeuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
3cjsA	6.8528e+01	3cjsA/T0499-3cjsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f6eA	7.1099e+01	2f6eA/T0499-2f6eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001