# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igd	61	9.13e-10		
2igdA	61	9.18e-10	d.15.7.1	37821
2qmtA	56	1.36e-09		
2on8A	56	1.38e-09		
2gi9A	56	1.42e-09		
2b7eA	59	3.296		
1q67A	231	29.22	b.55.1.7	95960
1wchA	315	34.69	c.45.1.2	114508
2qsbA	89	35.32		
2h6fB	437	37.34	a.102.4.3	136186
2d4rA	147	38.64	d.129.3.6	131256
2qklA	127	39.09		
2qzgA	94	43.41		
1z3xA	238	47.96	a.118.1.22,a.261.1.1	124416,124417
1c44A	123	52.69	d.106.1.1	40795
2rghA	571	55.76		
2r25B	133	61.72		
2inpC	328	65.22		
2qs7A	144	69.91		
2ahnA	222	74.51		
2i6cA	160	76.60	d.108.1.1	137095
5hpgA	84	79.89	g.14.1.1	44642
1ptf	88	82.01		
1ptfA	88	86.56	d.94.1.1	40549
3b4sA	94	86.74		
1u8tA	129	87.00	c.23.1.1	113192
1eeuA	114	87.98	b.1.1.1	20546