Best Alignments for T0499

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2igdA	6.6920e-14	2igdA/T0499-2igdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
2igd	1.0017e-13	2igd/T0499-2igd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qmtA	1.4328e-13	2qmtA/T0499-2qmtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2on8A	2.4154e-13	2on8A/T0499-2on8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gi9A	4.0506e-13	2gi9A/T0499-2gi9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b7eA	1.1609e+00	2b7eA/T0499-2b7eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cvrA	2.0230e+01	1cvrA/T0499-1cvrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.12 c.17.1.2
1v2yA	4.4087e+01	1v2yA/T0499-1v2yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.1.1
1ql3A	5.4585e+01	1ql3A/T0499-1ql3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
2q00A	5.5174e+01	2q00A/T0499-2q00A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qn2A	6.0617e+01	1qn2A/T0499-1qn2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
2f6eA	6.3819e+01	2f6eA/T0499-2f6eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1krnA	6.5332e+01	1krnA/T0499-1krnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1
2qklA	7.1103e+01	2qklA/T0499-2qklA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i71A	7.2313e+01	1i71A/T0499-1i71A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1
2qsbA	7.3238e+01	2qsbA/T0499-2qsbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sc3A	7.4494e+01	1sc3A/T0499-1sc3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.17.1.1
3cjsA	7.5296e+01	3cjsA/T0499-3cjsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nl1A	7.5551e+01	1nl1A/T0499-1nl1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.14.1.1 g.32.1.1
1qx2A	7.6833e+01	1qx2A/T0499-1qx2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001