# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igdA	61	3.73e-08	d.15.7.1	37821
2igd	61	4.12e-08		
2gi9A	56	5.49e-08		
2on8A	56	5.58e-08		
2qmtA	56	6.81e-08		
2b7eA	59	6.825		
1cvrA	435	9.752	b.1.18.12,c.17.1.2	21949,31006
2qsbA	89	31.69		
1v0jA	399	36.69		
2qzgA	94	45.18		
1oxkB	134	50.07	c.23.1.1	93691
1q67A	231	57.74	b.55.1.7	95960
1e29A	135	62.20	a.3.1.1	59161
3cu5A	141	62.34		
1q1uA	144	72.31	b.42.1.1	95608
1sc3A	178	73.67	c.17.1.1	105416
2qs7A	144	74.18		
1qqfA	277	79.17	a.102.4.4	18875
1dpuA	99	83.01	a.4.5.16	16150
1sg5A	86	86.75	b.137.1.2	118960
2d4rA	147	88.70	d.129.3.6	131256