PFRMAT RR
TARGET T0499
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
REMARK 
REMARK Starting column is 1
MODEL 1
TTYKLILNLKQAKEEAIKEAVDAGTAEKYFKLIANAKTVEGVWTYKDEIK
TFTVTE
4 13 0 8 0.521126
4 14 0 8 0.441437
4 15 0 8 0.429762
4 16 0 8 0.637789
4 17 0 8 0.611369
4 18 0 8 0.3304
4 19 0 8 0.399171
4 20 0 8 0.658671
4 21 0 8 0.515788
4 23 0 8 0.572554
4 25 0 8 0.345979
4 26 0 8 0.577293
4 29 0 8 0.581351
4 30 0 8 0.569544
4 33 0 8 0.550686
4 34 0 8 0.523176
4 39 0 8 0.47713
4 40 0 8 0.344636
4 41 0 8 0.654199
4 42 0 8 0.620218
4 43 0 8 0.750711
4 44 0 8 0.714894
4 45 0 8 0.756468
4 46 0 8 0.526602
4 47 0 8 0.518847
4 48 0 8 0.489412
4 49 0 8 0.63366
4 50 0 8 0.670729
4 51 0 8 0.752811
4 52 0 8 0.872614
4 53 0 8 0.816612
5 14 0 8 0.469309
5 15 0 8 0.478542
5 16 0 8 0.80675
5 17 0 8 0.789661
5 18 0 8 0.362115
5 19 0 8 0.428776
5 20 0 8 0.843471
5 21 0 8 0.717913
5 23 0 8 0.710689
5 25 0 8 0.394075
5 26 0 8 0.825553
5 29 0 8 0.74759
5 30 0 8 0.847718
5 33 0 8 0.736711
5 34 0 8 0.770142
5 39 0 8 0.618788
5 40 0 8 0.334431
5 41 0 8 0.760763
5 42 0 8 0.66992
5 43 0 8 0.865656
5 44 0 8 0.731093
5 45 0 8 0.807686
5 46 0 8 0.420677
5 47 0 8 0.501892
5 48 0 8 0.529699
5 49 0 8 0.717127
5 50 0 8 0.771236
5 51 0 8 0.774416
5 52 0 8 0.924918
5 53 0 8 0.770883
6 15 0 8 0.466355
6 16 0 8 0.790178
6 17 0 8 0.764128
6 18 0 8 0.332886
6 19 0 8 0.391219
6 20 0 8 0.818073
6 21 0 8 0.685059
6 23 0 8 0.637783
6 25 0 8 0.35682
6 26 0 8 0.82052
6 29 0 8 0.707385
6 30 0 8 0.838529
6 33 0 8 0.70089
6 34 0 8 0.748669
6 39 0 8 0.635789
6 40 0 8 0.409842
6 41 0 8 0.794052
6 42 0 8 0.707827
6 43 0 8 0.866582
6 44 0 8 0.723356
6 45 0 8 0.755617
6 46 0 8 0.376453
6 47 0 8 0.524897
6 48 0 8 0.582312
6 49 0 8 0.7537
6 50 0 8 0.79911
6 51 0 8 0.770837
6 52 0 8 0.885806
6 53 0 8 0.686072
7 16 0 8 0.871603
7 17 0 8 0.847841
7 18 0 8 0.443043
7 19 0 8 0.51196
7 20 0 8 0.881832
7 21 0 8 0.78468
7 22 0 8 0.385762
7 23 0 8 0.753969
7 25 0 8 0.476371
7 26 0 8 0.874837
7 27 0 8 0.390145
7 29 0 8 0.792235
7 30 0 8 0.884439
7 31 0 8 0.402912
7 33 0 8 0.767246
7 34 0 8 0.799439
7 38 0 8 0.335242
7 39 0 8 0.699799
7 40 0 8 0.465666
7 41 0 8 0.831461
7 42 0 8 0.70392
7 43 0 8 0.871163
7 44 0 8 0.704797
7 45 0 8 0.76791
7 46 0 8 0.369072
7 47 0 8 0.565141
7 48 0 8 0.61747
7 49 0 8 0.772947
7 50 0 8 0.809504
7 51 0 8 0.73809
7 52 0 8 0.871869
7 53 0 8 0.587047
8 17 0 8 0.533489
8 20 0 8 0.54318
8 21 0 8 0.40318
8 23 0 8 0.3982
8 26 0 8 0.47752
8 29 0 8 0.439039
8 30 0 8 0.409747
8 33 0 8 0.365194
8 39 0 8 0.457698
8 40 0 8 0.411546
8 41 0 8 0.701864
8 42 0 8 0.619965
8 43 0 8 0.703562
8 44 0 8 0.588968
8 45 0 8 0.583294
8 46 0 8 0.368845
8 47 0 8 0.518541
8 48 0 8 0.559734
8 49 0 8 0.663005
8 50 0 8 0.657273
8 51 0 8 0.614271
8 52 0 8 0.613724
8 53 0 8 0.473446
9 19 0 8 0.373418
9 20 0 8 0.683795
9 21 0 8 0.49586
9 23 0 8 0.541458
9 25 0 8 0.352036
9 26 0 8 0.632245
9 29 0 8 0.583253
9 30 0 8 0.541428
9 33 0 8 0.503435
9 34 0 8 0.411989
9 38 0 8 0.338513
9 39 0 8 0.519299
9 40 0 8 0.419595
9 41 0 8 0.724562
9 42 0 8 0.617853
9 43 0 8 0.738559
9 44 0 8 0.573429
9 45 0 8 0.613935
9 46 0 8 0.375964
9 47 0 8 0.538963
9 48 0 8 0.570286
9 49 0 8 0.673969
9 50 0 8 0.684041
9 51 0 8 0.612766
9 52 0 8 0.677706
9 53 0 8 0.480812
10 20 0 8 0.357386
10 39 0 8 0.348276
10 41 0 8 0.52133
10 42 0 8 0.411575
10 43 0 8 0.470271
10 44 0 8 0.383276
10 45 0 8 0.396646
10 47 0 8 0.41273
10 48 0 8 0.413966
10 49 0 8 0.465127
10 50 0 8 0.428841
10 51 0 8 0.396387
10 52 0 8 0.358824
11 20 0 8 0.327418
11 41 0 8 0.401056
11 42 0 8 0.343309
11 43 0 8 0.396579
11 44 0 8 0.34834
11 45 0 8 0.369461
11 47 0 8 0.34148
11 48 0 8 0.338799
11 49 0 8 0.362044
11 50 0 8 0.335073
11 51 0 8 0.329627
12 21 0 8 0.51657
12 23 0 8 0.58081
12 25 0 8 0.4395
12 26 0 8 0.672562
12 29 0 8 0.631821
12 30 0 8 0.562413
12 33 0 8 0.509167
12 34 0 8 0.395574
12 39 0 8 0.374516
12 41 0 8 0.511288
12 42 0 8 0.428838
12 43 0 8 0.556698
12 44 0 8 0.450902
12 45 0 8 0.507229
12 46 0 8 0.324986
12 47 0 8 0.401944
12 48 0 8 0.403347
12 49 0 8 0.455964
12 50 0 8 0.461545
12 51 0 8 0.419026
12 52 0 8 0.51426
12 53 0 8 0.376445
13 23 0 8 0.471525
13 25 0 8 0.374189
13 26 0 8 0.513919
13 29 0 8 0.516168
13 30 0 8 0.417039
13 33 0 8 0.388429
13 39 0 8 0.31933
13 41 0 8 0.456749
13 42 0 8 0.367671
13 43 0 8 0.45863
13 44 0 8 0.38895
13 45 0 8 0.43329
13 47 0 8 0.376408
13 48 0 8 0.359344
13 49 0 8 0.399354
13 50 0 8 0.363624
13 51 0 8 0.352988
13 52 0 8 0.379159
14 23 0 8 0.448163
14 25 0 8 0.330144
14 26 0 8 0.450779
14 29 0 8 0.480104
14 30 0 8 0.381516
14 33 0 8 0.365495
14 41 0 8 0.424664
14 43 0 8 0.415325
14 44 0 8 0.334137
14 45 0 8 0.393137
14 47 0 8 0.353168
14 48 0 8 0.325424
14 49 0 8 0.376011
14 50 0 8 0.333023
14 51 0 8 0.330704
14 52 0 8 0.357533
15 26 0 8 0.41204
15 29 0 8 0.447612
15 30 0 8 0.360743
15 33 0 8 0.334403
15 41 0 8 0.403466
15 43 0 8 0.408554
15 44 0 8 0.328529
15 45 0 8 0.389413
15 47 0 8 0.340419
15 49 0 8 0.364418
15 50 0 8 0.319417
15 51 0 8 0.331396
15 52 0 8 0.345952
16 25 0 8 0.49799
16 26 0 8 0.758035
16 27 0 8 0.345837
16 29 0 8 0.688194
16 30 0 8 0.676089
16 31 0 8 0.337627
16 32 0 8 0.335462
16 33 0 8 0.592778
16 34 0 8 0.507044
16 39 0 8 0.431599
16 41 0 8 0.573685
16 42 0 8 0.428854
16 43 0 8 0.634024
16 44 0 8 0.452461
16 45 0 8 0.568288
16 47 0 8 0.426837
16 48 0 8 0.407144
16 49 0 8 0.504128
16 50 0 8 0.494468
16 51 0 8 0.446381
16 52 0 8 0.58965
16 53 0 8 0.392935
17 26 0 8 0.850653
17 27 0 8 0.473869
17 28 0 8 0.408925
17 29 0 8 0.770587
17 30 0 8 0.771904
17 31 0 8 0.43183
17 32 0 8 0.430949
17 33 0 8 0.695108
17 34 0 8 0.639745
17 35 0 8 0.32975
17 36 0 8 0.327524
17 38 0 8 0.325572
17 39 0 8 0.551618
17 41 0 8 0.675209
17 42 0 8 0.468996
17 43 0 8 0.71871
17 44 0 8 0.487122
17 45 0 8 0.642416
17 47 0 8 0.482199
17 48 0 8 0.451026
17 49 0 8 0.581053
17 50 0 8 0.559565
17 51 0 8 0.477496
17 52 0 8 0.663244
17 53 0 8 0.377985
18 29 0 8 0.56741
18 30 0 8 0.496943
18 33 0 8 0.459312
18 34 0 8 0.360794
18 39 0 8 0.3821
18 41 0 8 0.504252
18 42 0 8 0.31915
18 43 0 8 0.471549
18 44 0 8 0.323544
18 45 0 8 0.443011
18 47 0 8 0.407734
18 48 0 8 0.340562
18 49 0 8 0.424568
18 50 0 8 0.34888
18 51 0 8 0.342335
18 52 0 8 0.387548
19 29 0 8 0.441212
19 30 0 8 0.36546
19 33 0 8 0.328698
19 41 0 8 0.39895
19 43 0 8 0.389563
19 45 0 8 0.372594
19 47 0 8 0.328308
19 49 0 8 0.350265
19 52 0 8 0.328937
20 29 0 8 0.767941
20 30 0 8 0.806562
20 31 0 8 0.407329
20 32 0 8 0.390554
20 33 0 8 0.690443
20 34 0 8 0.669499
20 39 0 8 0.512511
20 41 0 8 0.642456
20 42 0 8 0.437145
20 43 0 8 0.724895
20 44 0 8 0.466835
20 45 0 8 0.636736
20 47 0 8 0.42316
20 48 0 8 0.399135
20 49 0 8 0.554396
20 50 0 8 0.54642
20 51 0 8 0.470213
20 52 0 8 0.674956
20 53 0 8 0.393312
21 30 0 8 0.836633
21 31 0 8 0.452865
21 32 0 8 0.44189
21 33 0 8 0.739849
21 34 0 8 0.717652
21 35 0 8 0.335627
21 36 0 8 0.332505
21 37 0 8 0.319803
21 38 0 8 0.336216
21 39 0 8 0.587948
21 41 0 8 0.700657
21 42 0 8 0.480297
21 43 0 8 0.753221
21 44 0 8 0.497989
21 45 0 8 0.673805
21 47 0 8 0.488555
21 48 0 8 0.447647
21 49 0 8 0.598157
21 50 0 8 0.567491
21 51 0 8 0.483968
21 52 0 8 0.681663
21 53 0 8 0.380992
22 33 0 8 0.389519
22 39 0 8 0.327424
22 41 0 8 0.461258
22 43 0 8 0.45214
22 44 0 8 0.323781
22 45 0 8 0.427273
22 47 0 8 0.367172
22 49 0 8 0.386102
22 51 0 8 0.318647
22 52 0 8 0.332451
23 32 0 8 0.483005
23 33 0 8 0.736419
23 34 0 8 0.659846
23 35 0 8 0.354332
23 36 0 8 0.383492
23 37 0 8 0.328261
23 39 0 8 0.593762
23 41 0 8 0.700971
23 42 0 8 0.452121
23 43 0 8 0.745062
23 44 0 8 0.461648
23 45 0 8 0.684519
23 47 0 8 0.488482
23 48 0 8 0.445471
23 49 0 8 0.608895
23 50 0 8 0.5564
23 51 0 8 0.494139
23 52 0 8 0.647181
23 53 0 8 0.37542
25 41 0 8 0.335554
25 43 0 8 0.345953
25 45 0 8 0.329808
26 35 0 8 0.375063
26 36 0 8 0.357071
26 39 0 8 0.655889
26 41 0 8 0.759653
26 42 0 8 0.510656
26 43 0 8 0.818808
26 44 0 8 0.533785
26 45 0 8 0.734083
26 47 0 8 0.476911
26 48 0 8 0.44571
26 49 0 8 0.650088
26 50 0 8 0.617263
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26 52 0 8 0.726441
26 53 0 8 0.369558
27 36 0 8 0.412394
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27 38 0 8 0.36251
27 39 0 8 0.542204
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27 42 0 8 0.426076
27 43 0 8 0.662557
27 44 0 8 0.412687
27 45 0 8 0.608052
27 47 0 8 0.504963
27 48 0 8 0.419873
27 49 0 8 0.542038
27 50 0 8 0.461394
27 51 0 8 0.435406
27 52 0 8 0.531085
27 53 0 8 0.329554
28 41 0 8 0.404059
28 43 0 8 0.375894
28 45 0 8 0.353443
28 49 0 8 0.329698
29 39 0 8 0.456577
29 41 0 8 0.578621
29 42 0 8 0.346585
29 43 0 8 0.626628
29 44 0 8 0.359832
29 45 0 8 0.552196
29 47 0 8 0.381381
29 48 0 8 0.318327
29 49 0 8 0.468529
29 50 0 8 0.411566
29 51 0 8 0.376693
29 52 0 8 0.541075
30 39 0 8 0.770035
30 40 0 8 0.320973
30 41 0 8 0.832747
30 42 0 8 0.609047
30 43 0 8 0.883898
30 44 0 8 0.616902
30 45 0 8 0.803973
30 47 0 8 0.544577
30 48 0 8 0.511715
30 49 0 8 0.733042
30 50 0 8 0.710117
30 51 0 8 0.598603
30 52 0 8 0.808914
30 53 0 8 0.437326
31 40 0 8 0.337374
31 41 0 8 0.703175
31 42 0 8 0.478752
31 43 0 8 0.729723
31 44 0 8 0.463215
31 45 0 8 0.681874
31 47 0 8 0.544078
31 48 0 8 0.446424
31 49 0 8 0.582121
31 50 0 8 0.513504
31 51 0 8 0.48832
31 52 0 8 0.604984
31 53 0 8 0.388352
32 41 0 8 0.500638
32 43 0 8 0.484476
32 45 0 8 0.441159
32 47 0 8 0.359178
32 49 0 8 0.385196
32 51 0 8 0.321746
32 52 0 8 0.366504
33 42 0 8 0.484106
33 43 0 8 0.774358
33 44 0 8 0.507871
33 45 0 8 0.678465
33 47 0 8 0.425989
33 48 0 8 0.393051
33 49 0 8 0.568463
33 50 0 8 0.566411
33 51 0 8 0.500536
33 52 0 8 0.710508
33 53 0 8 0.428121
34 43 0 8 0.924481
34 44 0 8 0.743948
34 45 0 8 0.866774
34 46 0 8 0.352667
34 47 0 8 0.588418
34 48 0 8 0.591803
34 49 0 8 0.773822
34 50 0 8 0.779454
34 51 0 8 0.68372
34 52 0 8 0.862009
34 53 0 8 0.555592
35 44 0 8 0.524318
35 45 0 8 0.674501
35 46 0 8 0.371117
35 47 0 8 0.545539
35 48 0 8 0.48098
35 49 0 8 0.562274
35 50 0 8 0.541261
35 51 0 8 0.482436
35 52 0 8 0.611245
35 53 0 8 0.425545
36 45 0 8 0.47736
36 47 0 8 0.387824
36 48 0 8 0.323113
36 49 0 8 0.362392
36 50 0 8 0.336707
36 51 0 8 0.317893
36 52 0 8 0.40275
36 53 0 8 0.319764
37 47 0 8 0.331225
37 53 0 8 0.327422
38 47 0 8 0.377381
38 48 0 8 0.337101
38 49 0 8 0.365148
38 50 0 8 0.352242
38 51 0 8 0.400134
38 52 0 8 0.451687
38 53 0 8 0.481188
39 48 0 8 0.542422
39 49 0 8 0.639549
39 50 0 8 0.695465
39 51 0 8 0.635305
39 52 0 8 0.832045
39 53 0 8 0.654888
40 49 0 8 0.560249
40 50 0 8 0.571951
40 51 0 8 0.656983
40 52 0 8 0.742668
40 53 0 8 0.772877
41 50 0 8 0.785614
41 51 0 8 0.786848
41 52 0 8 0.910714
41 53 0 8 0.842689
42 51 0 8 0.820044
42 52 0 8 0.898171
42 53 0 8 0.867364
43 52 0 8 0.951615
43 53 0 8 0.870412
44 53 0 8 0.832929
END