# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2on8A	56	1.51e-11		
2gi9A	56	1.52e-11		
2qmtA	56	1.52e-11		
1mi0A	65	1.70e-11	d.15.7.1	79135
1mhxA	65	1.72e-11	d.15.7.1	79134
1pgx	83	1.74e-11		
2igd	61	1.76e-11		
2igdA	61	1.97e-11	d.15.7.1	37821
2b7eA	59	5.503		
1bwwA	109	21.55	b.1.1.1	20518
1eeuA	114	24.41	b.1.1.1	20546
2qsbA	89	27.82		
1eeqA	114	29.18	b.1.1.1	20544
2qzgA	94	30.61		
1ql3A	99	31.29	a.3.1.1	15822
2f15A	96	33.43		
3cjsA	60	34.32		
1i8kA	107	35.64	b.1.1.1	71130
1qfwM	108	36.04	b.1.1.1	20436
1a7nL	107	43.95	b.1.1.1	19940
1b2iA	83	44.03	g.14.1.1	44640
1uzcA	71	44.35	a.159.2.1	100222
1j1xL	107	47.50	b.1.1.1	77064
1a2yA	107	47.87	b.1.1.1	19926
1h8gA	95	47.99	b.109.1.1	65735
1g7jA	107	50.49	b.1.1.1	19932
1xg0A	76	54.88	d.184.1.1	115273
1i71A	83	55.91	g.14.1.1	61864
1cd8	114	56.17		
1mqkL	120	58.64	b.1.1.1	85054
1dlfL	113	64.75	b.1.1.1	20382
1co6A	107	65.18	a.3.1.1	15894
1f5vA	240	66.77	d.90.1.1	40255
2i7hA	189	68.46		
2hz5A	106	68.56		
1z0nA	96	72.37		
2f6eA	127	75.36		
3bm1A	183	77.28		
1nijA	318	77.50	c.37.1.10,d.237.1.1	85741,85742
1tr0A	108	80.48	d.58.4.4	107261
1krnA	88	80.68	g.14.1.1	44629
2jt1A	77	86.25		
1pmlA	86	88.58	g.14.1.1	44632