# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1t62A	166	35.24	b.122.1.4	106541
1k6dA	220	36.48	c.124.1.2	72082
1ev7A	317	36.50	c.52.1.9	33315
1smpI	101	41.86	b.61.2.1	27417
3d0kA	304	45.37		
1yslA	402	57.50		
1an7A	136	57.75	d.140.1.1	41465
1xmxA	385	63.49	c.52.1.26	115568
2pn0A	141	65.59		
1jiwI	106	68.49	b.61.2.1	63078
2gqcA	70	70.08		
2hlkA	255	72.13		
1sr4C	166	72.26	b.42.2.1	105950
2adoA	196	72.79		
3d00A	191	73.01		
1nhp	447	82.24		
2hrgA	496	82.87		
1e0cA	271	84.39	c.46.1.2,c.46.1.2	32717,32718
3brcA	156	86.96