# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1an7A	136	30.05	d.140.1.1	41465
1t62A	166	31.27	b.122.1.4	106541
1smpI	101	34.51	b.61.2.1	27417
2gqcA	70	35.73		
2adoA	196	37.97		
1nhp	447	47.68		
1jiwI	106	48.32	b.61.2.1	63078
1sr4C	166	50.23	b.42.2.1	105950
1ev7A	317	51.47	c.52.1.9	33315
1g2oA	268	56.79	c.56.2.1	60228
1qe5A	266	57.72	c.56.2.1	33784
3cz6A	168	64.14		
2okfA	140	64.42		
1k6dA	220	71.90	c.124.1.2	72082
2hlkA	255	83.73		
1xmxA	385	87.06	c.52.1.26	115568
3pyp	125	87.76		
3d0kA	304	88.90