Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1rmwA	2.1345e+01	1rmwA/T0487-1rmwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cstA	3.7291e+01	2cstA/T0487-2cstA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.1
2uubT	3.7701e+01	2uubT/T0487-2uubT-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.7.6.1
1fjgT	4.2386e+01	1fjgT/T0487-1fjgT-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.7.6.1
2b82A	4.4947e+01	2b82A/T0487-2b82A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.108.1.12
1smpI	5.0660e+01	1smpI/T0487-1smpI-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.61.2.1
1ju3A	5.4990e+01	1ju3A/T0487-1ju3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.13 c.69.1.21
2ay1A	6.3058e+01	2ay1A/T0487-2ay1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.1
2gqcA	6.8592e+01	2gqcA/T0487-2gqcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2idqA	7.6662e+01	2idqA/T0487-2idqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1oftA	8.0103e+01	1oftA/T0487-1oftA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fuvA	8.1394e+01	2fuvA/T0487-2fuvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2giaA	8.4531e+01	2giaA/T0487-2giaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.18.1.4
1xd5A	8.7310e+01	1xd5A/T0487-1xd5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.78.1.1
2vqeT	8.9128e+01	2vqeT/T0487-2vqeT-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nhpA	9.0502e+01	1nhpA/T0487-1nhpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.3.1.5 c.3.1.5 d.87.1.1
1jiwI	9.3793e+01	1jiwI/T0487-1jiwI-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.61.2.1
1iow	9.5086e+01	1iow/T0487-1iow-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u04A	9.5389e+01	1u04A/T0487-1u04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ofuX	9.6134e+01	1ofuX/T0487-1ofuX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001