# List of top-scoring protein chains for t06-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ju3A	583	18.44	b.18.1.13,c.69.1.21	67300,67301
1smpI	101	18.82	b.61.2.1	27417
1nuyA	337	33.81	e.7.1.1	86213
2ps5A	374	39.67		
1svmA	377	45.15	c.37.1.20	112126
1xd5A	112	49.21	b.78.1.1	115155
1ekgA	127	49.96	d.82.2.1	40021
2b82A	211	50.33	c.108.1.12	128057
1jiwI	106	53.96	b.61.2.1	63078
1rmwA	212	56.54		
2fuvA	549	57.29		
1nhpA	447	60.95	c.3.1.5,c.3.1.5,d.87.1.1	30549,30550,40196
2idqA	105	61.94		
2v36A	376	67.69		
2gqcA	70	69.31		
1iow	306	71.84		
1tyoA	435	75.38		
1thmA	279	76.60	c.41.1.1	32544
1g38A	393	79.37	c.66.1.27,d.287.1.1	111567,111568
1b2pA	119	81.76	b.78.1.1	27998
2btlA	134	84.90	b.148.1.1	129154