# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u04A	771	2.19e-19	b.34.14.1,c.55.3.10	107539,107540
1w9hA	427	8.87e-17	c.55.3.10	120785
1uh6A	100	5.526	d.15.1.1	99394
1m6iA	493	14.92	c.3.1.5,c.3.1.5,d.87.1.1	74533,74534,74535
1shuX	182	14.98	c.62.1.1	98882
1mf7A	194	15.46	c.62.1.1	84937
1gv4A	528	17.34	c.3.1.5,c.3.1.5,d.87.1.1	70589,70590,70591
1v7pC	200	44.22	c.62.1.1	108408
1glcG	501	47.21	c.55.1.4,c.55.1.4	33519,33520
1ido	192	47.91		
3pmgA	561	48.36	c.84.1.1,c.84.1.1,c.84.1.1,d.129.2.1	35408,35409,35410,41301
1rj9A	304	51.29	a.24.13.1,c.37.1.10	97553,97554
1a6f	119	62.21		
1xk4A	93	64.60	a.39.1.2	122055
1xdpA	687	69.17	a.7.15.1,d.322.1.2,d.136.1.4,d.136.1.4	121896,121897,121898,121899
1wkvA	389	70.23	c.79.1.1	120989
2dgbA	84	72.24		
2z08A	137	78.70		
1jeqB	565	79.54	b.131.1.2,c.62.1.4	90368,90369
1snrA	341	79.77	b.6.1.3,b.6.1.3	105823,105824
3be4A	217	80.54		
1d6tA	117	82.03	d.14.1.2	37565
1spbP	78	88.85	d.58.3.2	39068