Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1u04A	1.7918e-02	1u04A/T0487-1u04A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1 c.55.3.10
3brqA	1.7169e+00	3brqA/T0487-3brqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dztA	2.5548e+00	2dztA/T0487-2dztA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w9hA	3.2088e+00	1w9hA/T0487-1w9hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.3.10
1qopA	3.5960e+00	1qopA/T0487-1qopA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.4
1ujpA	4.3321e+00	1ujpA/T0487-1ujpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.4
2ekcA	5.7428e+00	2ekcA/T0487-2ekcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bblA	5.8186e+00	3bblA/T0487-3bblA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1geqA	6.1457e+00	1geqA/T0487-1geqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.4
1jftA	6.4133e+00	1jftA/T0487-1jftA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.5 c.93.1.1
1qpzA	7.9798e+00	1qpzA/T0487-1qpzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.5 c.93.1.1
2driA	8.8356e+00	2driA/T0487-2driA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2tysA	8.8457e+00	2tysA/T0487-2tysA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.4
2rgyA	9.3408e+00	2rgyA/T0487-2rgyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1efaA	9.5258e+00	1efaA/T0487-1efaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.5 c.93.1.1
1kfcA	1.0010e+01	1kfcA/T0487-1kfcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.4
2ioyA	1.0493e+01	2ioyA/T0487-2ioyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uqwA	1.0915e+01	1uqwA/T0487-1uqwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
2h3hA	1.4572e+01	2h3hA/T0487-2h3hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fb2A	1.4717e+01	2fb2A/T0487-2fb2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001