Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1u04A	1.8658e-40	1u04A/T0487-1u04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1 c.55.3.10
1w9hA	3.6259e-36	1w9hA/T0487-1w9hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.3.10
1jx6A	1.9470e+00	1jx6A/T0487-1jx6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2qh9A	5.3505e+00	2qh9A/T0487-2qh9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gudA	5.7100e+00	1gudA/T0487-1gudA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1usgA	1.2554e+01	1usgA/T0487-1usgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2hqbA	1.2753e+01	2hqbA/T0487-2hqbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
8abp	1.2793e+01	8abp/T0487-8abp-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tjyA	1.4219e+01	1tjyA/T0487-1tjyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1z15A	1.4622e+01	1z15A/T0487-1z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dri	1.5530e+01	2dri/T0487-2dri-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fqxA	1.8019e+01	2fqxA/T0487-2fqxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pea	2.4979e+01	1pea/T0487-1pea-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dbqA	2.5097e+01	1dbqA/T0487-1dbqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1mkzA	2.7802e+01	1mkzA/T0487-1mkzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.57.1.1
2dxnA	2.9552e+01	2dxnA/T0487-2dxnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gca	3.0294e+01	1gca/T0487-1gca-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rjoA	3.1429e+01	2rjoA/T0487-2rjoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3d02A	3.5180e+01	3d02A/T0487-3d02A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bykA	3.5347e+01	1bykA/T0487-1bykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001