(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0480 TaT88, Thermoplasma acidophilum, 55 residues
    • gi|1184755|gb|AAA97886.1|_104:147 ubiquitin c-terminal extension protein UBIcep86 [Taxonomy]
    • gi|289726|gb|AAA28160.1|_98:138 ubiquitin-like:ribosomal protein fusion protein [Taxonomy]
    • gi|94378076|ref|XP_001002242.1|_104:145 PREDICTED: similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) [Mus musculus]
    • gi|82902501|ref|XP_930453.1|_103:144 PREDICTED: similar to ubiquitin/40S ribosomal protein S27a fusion protein isoform 2 [Mus musculus]
               10            20               30              40       
               |             |                |               |       
   1 MQKRELYEI.A.D..G.KLVRKHRFC..P..R..CGPG.VFLAEH...A...DRYSCGRCGYTEF
   2 MQKRELYEI.A.D..G.KLVRKHRFC..P..R..CGPG.VFLAEH...A...DRFTCGRCGYTEF
   3 -QKWKLYEI.K.D..G.KVIRKNKFC..P..R..CGPG.VFMADH...G...DRWACGKCGYTEW
   4 -QKWKLYIV.K.D..G.KVIRKNKFC..P..R..CGPG.VFMADH...G...DRWACGRCGYTEW
   5 -QKWKLYIV.K.D..G.KVIRKNKFC..P..R..CGPG.VFMADH...G...DRWACGKCGYTEW
   6 -QKWKLYIV.K.D..G.KVIRKNKFC..P..R..CGPG.VFMADH...G...DRWACGRCGYTEW
   7 -QKWKLYIV.K.D..G.KVIRKNKFC..P..R..CGPG.VFMADH...G...DRWACGKCGYTEW
   8 MQKRELYEI.A.D..G.KLVRKHRFC..P..R..CGPG.VFLAEH...A...DRYSCGRCGYTEF
   9 -KKSDYYKV.E.G..N.TVERLKKVC..P..K..CGAG.VFMAEH...L...NRFACGKCGYMEY
  10 --KYKYYKI.E.G..D.KVIRLKKTC..P..R..CGPG.VFMAEH...L...NRYACGKCGYMEW
  11 --RAKLYEV.K.D..G.KVERKNPFC..P..R..CGPG.VFMADH...G...NRYACGRCGYTEF
  12 -KKSDYYKV.E.G..N.TVERLKKVC..P..K..CGAG.VFMAEH...L...NRFACGKCGYLEY
  13 -KKSDYYKV.E.G..N.AVERLKKAC..P..K..CGAG.VFMAEH...L...NRFACGKCGYMEY
  14 -KKSDYYKI.D.G..D.KVERLKKSC..P..K..CGEG.VFMAEH...L...NRFACGKCGYMEY
  15 -KKSDYYKV.E.G..N.TVERLKKAC..P..K..CGAG.VFMAEH...L...NRFACGKCGYLEY
  16 -EKRELYEL.K.D..N.KIVRKRRFC..P..R..CGPG.VFLAEH...E...DRFSCGRCGYTEF
  17 -QKWKLYEV.K.G..G.KVVRKNKFC..P..R..CGPG.VFMANH...K...DRWSCGRCGYTEW
  18 ---YRYYEI.K.G..E.KVVRKKKFC..P..R..CGEG.VFLAEH...K...DRLSCGKCGYTEF
  19 -KKFELYEV.K.D..G.KLVRKNPFC..V..R..CSNG.VFMADH...G...DRYACGKCGYTEW
  20 -KKSDYYKV.E.G..N.SVTRTKKAC..P..K..CGAG.VFMAEH...L...NRYACGKCGFLEY
  21 -EKRELYAV.E.A..D.KIVRKRRTC..P..R..CGAG.VFMAEH...S...DRYTCGKCKYTEF
  22 ----DYYKV.Q.G..D.SVTRLKQFC..P..R..CGPG.VFLADH...K...NRLACGKCGYTEF
  23 ----DYYKV.Q.G..D.SVTRLKQFC..P..R..CGPG.VFLADH...K...NRLACGKCGYTEF
  24 -KKSDLYKV.D.G..D.KIERKNPVC..P..R..CSDG.VFMADH...G...NRYACGKCGYTEM
  25 -KKYELYEV.K.D..G.KIVRKNPEC..V..R..CSHG.IFMADH...G...DRYACGRCGYTQW
  26 ----DYYKV.Q.G..D.SVTRIKQFC..P..R..CGPG.TFLADH...K...NRLTCGKCGYTEF
  27 ----DYYKV.N.G..E.SIERLRQFC..P..R..CGDG.VYLADH...K...DRLTCGKCGYTEF
  28 ---SAFFKV.E.G..D.KVTTTKKYC..P..R..CGPG.VIMADH...K...DRVACGKCGYTEF
  29 ------YEV.K.D..G.KVSRKGQTC..P..R..CGDG.VFMAAH...K...DRVSCGKCGYTEY
  30 -QKHNYYKV.E.G..D.KVEKLKKEC..P..R..CKGG.VFMAEH...L...NRFACGKCGYTEF
  31 --VWKYYEI.K.D..G.KLIRKKKVC..P..R..CGS-.-FMAEH...K...DRYHCGKCGYTEW
  32 --RSAYFKV.E.G..K.NAVPQRRYC..P..R..CGPG.VFMGEH...K...DRVTCGKCGYTEF
  33 ---HKYYQL.S.G..E.TIKARKPIC..P..R..CGNG.VFLAEH...E...DRMSCGRCGYTEF
  34 --RHECYEV.K.G..D.TAVLQKRHC..P..R..CGPG.VLMAAH...K...DRVACGKCGYTEF
  35 ---SELYTV.DaQ..G.KATTSHRAC..P..R..CGAG.VFMGEH...K...DRFSCGKCGYTEF
  36 ----RFYKI.E.D..G.KTVKLRHIC..S..R..CGKG.FFMAQH...K...DRRSCGKCGLTEF
  37 ----AYFKV.D.G..D.KVSRIKKVC..S..R..CGKG.TYMSEH...K...DRNTCGKCGLTEF
  38 ----KYYKV.D.G..D.KVVKLRREC..PaeT..CGAG.VFMAQH...F...NRTSCGRCGLTYF
  39 ----KYYKV.D.G..D.KVVKLRREC..PaeT..CGAG.VFMAQH...F...NRTSCGRCGLTYF
  40 --AWKYYSV.E.G..G.KLVRKRRQC..P..R..CGR-.-FMAEH...E...NRYSCGGCGYTEF
  41 ----KYYTI.K.G..D.TAEPTREYC..P..N..CGPG.IRIARH...A...DRCHCGRCGF---
  42 -----YYKV.D.De.G.KVAKLRKEC..P..N..CGPG.IFLANH...G...DRFYCGKC-----
  43 -----YYKV.D.De.G.KVAKLRKEC..P..N..CGPG.IFLANH...G...DRFYCGKC-----
  44 ----KFYKV.D.Ds.G.KVQRLRKQC..P..N..CGPG.TFMATH...F...DRVYCGKCA----
  45 ----KYYKV.D.G..D.KVVRLLKDC..PgeN..CGRG.VFMAAH...N...NRTYCGRCQ----
  46 ---------.-.N..G.KVSLQQKGC..P..K..CGPG.IFMAKH...Y...DRHYCGKCH----
  47 ----KYYKV.D.G..D.QVVRLLKDC..PgeN..CGRG.VFMAAH...N...NRTYCGRCQ----
  48 -----FYKVdE.N..G.KIFRLRREC..PmeR..CGAG.VFMAAM...S...DRHYCGKCGYT--
  49 ----KYYKVdE.N..G.KITRLRREC..PntE..CGAG.VFMASH...F...DRQYCGKCGLT--
  50 ----KYYKV.E.Dd.G.SVKRLRREC..P..N..CGAS.TFMANH...K...DRLYCGRC-----
  51 ---------.-.N..G.KVTRLRREC..PaeE..CGAG.VFMANH...F...DRQYCGKCGLTYF
  52 ----QFYKV.D.DttS.KVTRLRKEC..PnsE..CGAG.VFMANH...F...DRHYCGKCGL---
  53 ----KYYKVdE.N..G.KIHRLRREC..PaeQ..CGAG.VFMAAM...E...DRHYCGKCGYT--
  54 ----KYYKV.E.Dd.G.SVKRLRREC..P..N..CGAS.TFMANH...K...DRLYCGRC-----
  55 ----KYYKV.E.Dd.G.SVKRLRREC..P..N..CGAS.TFMANH...K...DRLYCGRC-----
  56 ----QFYKI.D.Gs.G.KVQRLRKEC..P..NatCGAG.TFMASH...F...DRHYCGKCGLT--
  57 ----QFYKI.D.Gs.G.KVQRLRKEC..P..NatCGAG.TFMASH...F...DRHYCGKCGLT--
  58 ----KYYKV.D.Ds.G.KIQRLRREC..PgaD..CGAG.IFMAAH...F...DRQYCGKCGLT--
  59 -----FYKVdE.N..G.KIHRLRREC..PgeQ..CGAG.VFMAAM...E...DRHYCGKCGYT--
  60 -----FYKV.D.Ds.G.KVQRLRKEC..PnpD..CGAG.TFMANH...F...DRHYCGKCGLT--
  61 ----KYYKV.D.Ds.G.KIQRLRREC..PgaD..CGAG.IFMAAH...F...DRQYCGKCGLT--
  62 -----FYKV.D.DatG.KVTRLRKEC..PntE..CGAG.VFMANH...F...DRHYCGKCGL---
  63 -----FYKV.D.Ds.G.KVQRLRKEC..PnpD..CGAG.TFMANH...F...DRHYCGKCGLT--
  64 -----FYKVdE.N..G.KIHRLRREC..PgeQ..CGAG.VFMAAM...E...DRHYCGKCGYT--
  65 -----FYKV.D.DatG.KVTRLRKEC..PntE..CGAG.VFMANH...F...DRHYCGKCGL---
  66 -----FYKVdE.N..G.KIHRLRREC..PdeK..CGAG.VFMAAM...E...DRHYCGKCGYT--
  67 -----FYKVdE.N..G.KIHRLRREC..PaeQ..CGAG.VFMAAM...E...DRHYCGKCGYT--
  68 -----FYKV.D.Dt.G.KVIRLRKEC..PnaE..CGAG.TFMANH...K...DRHYCGKCGL---
  69 ----QFYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  70 -----FYKV.D.Ds.G.KVQRLRKEC..PnaK..CGAG.TYMANH...F...DRYYCGKCGL---
  71 -----FYKV.D.Ds.G.KVQRLRKEC..PnpE..CGAG.TFMANH...F...DRHYCGKCGLT--
  72 -----FYKV.D.Gs.G.KVQRLRKEC..P..NatCGAG.TFMASH...F...DRHYCGKCGLT--
  73 -----FYKV.D.Gs.G.KVQRLRKEC..P..NatCGAG.TFMASH...F...DRHYCGKCGLT--
  74 -----FYKVdE.N..G.KIHRLRREC..PgeQ..CGAG.VFMAAM...E...DRHYCGKCGYT--
  75 -----FYKVdE.N..G.KIHRLRREC..PmeQ..CGAG.VFMAAM...E...DRHYCGKCGYT--
  76 -----FYKV.D.Dt.G.KVIRLRKEC..PnaE..CGAG.TFMANH...K...DRHYCGKCGL---
  77 -----FYKVdE.N..G.KIHRLRREC..PseQ..CGAG.VFMAAM...E...DRHYCGKCGYT--
  78 ----KYYKVgS.D..G.KIQRLRREC..PapT..CGAG.IFMAWH...K...DRQACGKCGL---
  79 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  80 -----FYKV.D.Dt.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  81 -----YYVI.E.G..N.KVKLKNKKC..P..R..CGS-.-IMAHH...LkpnERWSCGKCGYTEF
  82 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  83 ----QFYKI.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  84 ----QFYKI.D.Ds.G.KVSRLRKEC..PndE..CGAG.TFMANH...F...DRHYCGKCGL---
  85 ----QFYKV.D.DgtG.KVTRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  86 ---------.E.N..G.KIFRMRREC..PgeA..CGAG.VFMAAM...T...DRHYCGKCGYT--
  87 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCG----
  88 ----KLYKV.DaN..G.KITRLRRECtgE..R..CGAG.VFMANH...A...DRQYCGKCGLT--
  89 ---LKYYKV.DsD..G.KIKRLRREC..PsaE..CGAG.IFMAFH...K...DRQYCGKCGL---
  90 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  91 ---LKYYKV.DsD..G.KIKRLRREC..PsaE..CGAG.IFMAFH...K...DRQYCGKCGL---
  92 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  93 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  94 -----FYKV.D.DatG.KVTRLRKEC..P..NndCGAG.TFMANH...F...DRHYCGKCGL---
  95 -----FYKV.D.DstG.KVTRLRKEC..P..NadCGAG.TFMANH...F...DRHYCGKCGL---
  96 ----QFYKV.D.D..SrKVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  97 -----FYKV.D.DatG.KVTRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  98 ----QFYKV.D.DgtG.KVTRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
  99 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 100 ----KYYKV.DeN..G.KITRLRKECasP..S..CGGG.VFMASH...Q...NRYYCGKCHQT--
 101 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 102 ----KYYKVdE.N..G.KISRLRREC..PseQ..CGAG.VFMAAM...E...DRHYCGKCAYT--
 103 -----FYKV.D.Dt.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 104 -----FYKV.D.Dt.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 105 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKC-----
 106 ----KLYTV.D.Gk.G.LVQRSHKQC..P..Q..CPQG.VYMAKH...F...DRHYCGTC-----
 107 -----FYKV.D.Ds.G.KVQRLRKEC..PnsE..CGAG.TFMANH...F...DRHYCGKCGL---
 108 ----KYYKVdE.N..G.KITRLRREC..PseE..CGAG.VFMANH...F...DRQYCGKCCLT--
 109 -----FYKV.D.DatG.KVTRLRKEC..P..NndCGAG.TFMANH...F...DRHYCGKCGL---
 110 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 111 -----YYEI.V.D..G.KIKLKNKKC..P..K..CGS-.-VMAHHmkpR...ERWSCGRCGYTEF
 112 -----FYKV.D.DatG.KVTRLRKEC..P..NndCGAG.TFMANH...F...DRHYCGKCGL---
 113 -----FYKV.D.Ds.G.KVQRLRKEC..PntE..CGAG.TFMANH...F...DRHYCGKCG----
 114 -----FYKV.D.Ds.G.KVQRLRKEC..PntE..CGAG.TFMANH...F...DRHYCGKCG----
 115 ----KYYKI.DeN..G.KITRLRKECqqP..S..CGGG.VFMAQH...A...NRHYCGRC-----
 116 -----FYKV.D.Ds.G.KVQRLRKEC..PnaE..CGAG.SFMANH...F...DRHYCGKCGL---
 117 -----FYKVdE.S..G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCG----
 118 -----FYKVdE.N..G.KIHRLRREC..PseQ..CGAG.VFMAAM...E...DRHYCGKCGFT--
 119 -----FYKV.D.Ds.G.QVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 120 ----KYYKI.DeN..G.KITRLRKECqqP..S..CGGG.VFMAQH...A...NRHYCGRC-----
 121 ----KYYKVdE.N..G.KIHRLRREC..PgeN..CGAG.VFMAAH...E...DRHYCGKCNL---
 122 ----KYYKVdK.N..G.KISRLRRQC..Pd.E..CGAG.VFMGSH...L...DRHCCGKC-----
 123 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKC-----
 124 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCCL---
 125 -----FYKVdE.S..G.KVQRLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 126 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 127 ----KYYKVdE.N..G.KISRLRREC..PseQ..CGAG.VFMAAM...D...DRHYCGKCSYT--
 128 -----YYII.E.G..D.KIKLKNKKC..P..R..CGS-.-IMAHH...MkpvERWACGKCGYTEF
 129 ----KYYKV.DeN..G.KITRLRKECasP..S..CGGG.VFMASH...Q...NRYYCGKCHR---
 130 -----FYKV.D.DatG.KVTRLRKEC..P..NadCGAG.TFMANH...F...DRHYCGKCGL---
 131 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 132 -----FYKV.D.DatG.KVTRLRKEC..P..NadCGAG.TFMANH...F...DRHYCGKCGL---
 133 ----KYYKV.DeN..G.KITRLRKECasP..S..CGGG.VFMASH...Q...NRYYCGKCHR---
 134 ----KYYKVdE.N..G.KIHRLRREC..PadE..CGAG.VFMASH...F...DRHYCGKCC----
 135 ----KYYKVdE.N..G.KISRLRREC..PseE..CGAG.VFMASH...F...DRHYCGKCC----
 136 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 137 ----KLYTI.D.Nk.G.VVQRSHKQC..P..Q..CPQG.VYMAKH...F...DRHYCGTC-----
 138 ----KYYKVdE.N..G.KITRLRREC..P..NkyCGAG.VFMASH...F...DRQYCGKCCLT--
 139 ----KYYKV.DeN..G.KITRLRKECqqP..S..CGGG.VFMAQH...A...NRHYCGRC-----
 140 -----FYKV.D.Gs.G.KVQRLRKEC..P..NatCGAG.TFMASH...F...DRHYCGKCG----
 141 ----KYYKVdE.N..G.KIHRLRREC..PadE..CGAG.VFMASH...F...DRHYCGKCC----
 142 ----KYYKVdE.N..G.KIHRLRREC..PadE..CGAG.VFMASH...F...DRHYCGKCC----
 143 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 144 ----KFYKV.DsN..G.KVTRLRREC..PndK..CGAG.VFMASH...F...DREYCGKC-----
 145 ----KLYTV.D.Nk.G.SVQRSHKQC..P..Q..CPQG.VYMAKH...F...DRHYCGTC-----
 146 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 147 ----KYYKVdE.N..G.KIHRLRREC..PadE..CGAG.VFMASH...F...DRHYCGKCC----
 148 ----KLYNV.D.Nk.G.VVQRSHKQC..P..Q..CPQG.VYMAKH...F...DRHYCGTC-----
 149 ----KLYNV.D.Nk.G.VVQRSHKQC..P..Q..CPQG.VYMAKH...F...DRHYCGTC-----
 150 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 151 ----KYYKVdE.N..G.KIHRLRREC..PgeN..CGAG.VFMAAH...E...DRHYCGKCNL---
 152 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 153 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 154 ----KYYKVdE.N..G.KIHRLRREC..PadE..CGAG.VFMASH...F...DRHYCGKCC----
 155 ----KYYKVdE.N..G.KISRLRREC..PseE..CGAG.VFMASH...F...DRHYCGKCC----
 156 ----KYYKV.DeN..G.KITRLRKECqqP..S..CGGG.VFMAQH...A...NRHYCGRC-----
 157 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 158 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 159 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 160 ----KLYNV.D.Nk.G.VVQRSHKQC..P..Q..CPQG.VYMAKH...F...DRHYCGTC-----
 161 ----KYYKVdE.N..G.KIHRLRREC..PadE..CGAG.VFMASH...F...DRHYCGKCC----
 162 -----FYKV.D.DatG.KVTRLRKDC..PnaE..CHAG.VFMANH...F...DRHYCGKCGL---
 163 ------YDY.N.T..G.TIKRKNKIC..P..R..CGS-.-FMAFH...KwpvPRWHCGKCGHTEF
 164 ----KYYKVdE.N..G.KIHRLRREC..PadE..CGAG.VFMASH...F...DRHYCGKCC----
 165 ----KFYKV.DsN..G.KITRLRREC..PseK..CGAG.VFMASH...F...DREYCGKCA----
 166 ----KLYNV.D.Nk.G.VVQRSHKQC..P..Q..CPQG.VYMAKH...F...DRHYCGTC-----
 167 ----KYYKV.DeN..G.KISRLRREC..PntE..CGAG.VFMASH...F...DRQYCGKCAL---
 168 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMGSH...F...DRHYCGKC-----
 169 -----FYKVgD.D..G.KVFRLKRQC..D..N..CAPG.TLMASH...F...DRDYCGRCHL---
 170 ----KYYKVdE.N..G.KITRLRREC..PseE..CGAG.VFMASH...F...DRQYCGKCC----
 171 -----FYKVgD.D..G.KVFRLKKQC..N..N..CAPG.TLMASH...F...NRDYCGRCHL---
 172 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMGSH...F...DRHYCGKCC----
 173 ----KYYKVdE.N..G.KITRLRREC..P..NedCGAG.VFMASH...F...DRQYCGKCCL---
 174 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMGSH...F...DRHYCGKCC----
 175 ----KFYKVdE.N..G.KITRLRREC..P..NedCGAG.VFMASH...F...DRQYCGKCC----
 176 ---------.-.-..-.-----RETC..P..R..CGDT.V-LAEH...E...DRQHCGKCGYTEW
 177 -----FYKV.D.Gs.G.KVQRLKKEC..Psv-s.CGPG.TFMASH...F...DRHYCGKCGTT--
 178 ---------.-.-..-.-----KEMC..P..R..CGD-.TFLAAH...D...DRQVCGRCGYTEW
 179 -----FYKV.D.Gs.G.KVQRLKKEC..Psv-s.CGPG.TFMASH...F...DRHYCGKCGTT--
 180 ---------.-.N..G.KITRLRKECqqP..S..CGGG.VFMAQH...A...NRHYCGRC-----
 181 -----FYKVdE.N..G.KITRLRREC..PseE..CGAG.VFMASH...F...DRQYCGKCC----
 182 ----KFYKVdE.N..G.KITRLRREC..PseD..CGAG.VFMAAH...F...DRQYCGKCC----
 183 -----FYKVgD.D..G.KVFRLKKQC..D..N..CAPG.TLMAAH...F...NREYCGRCHL---
 184 -----YYEV.E.Q..D.SIKLKNKKC..P..R..CGS-.-IMAHHmkpL...ERWACGKCGYTEF
 185 ----KYYKVdE.N..G.KIHRLRREC..PaeS..CGAG.VFMAAH...E...NRHYCGKCH----
 186 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMGSH...F...DRHYCGKCC----
 187 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMGSH...F...DRHYCGKCC----
 188 -----FYKVdE.N..G.KVHRLRKEC..AaeN..CGPG.VFMAEM...P...NRFYCGKC-----
 189 --------M.E.N..G.EVVRCRREC..SseQ..CGAG.VFMATH...F...DRYYCGRC-----
 190 -----FYKVdE.N..G.KITRLRREC..PaeE..CGAG.VFMASH...Y...DRQYCGKCC----
 191 -----FYKVgD.D..G.KVFRLKKQC..N..N..CAPG.TLMASH...F...NRDYCGRCHL---
 192 ----KLYKV.D.Da.G.KVERLRKECisP..T..CGAG.VFVAQM...F...DRVYCGKC-----
 193 ----KYYKVdE.N..G.KISRLRREC..PsdE..CGAG.VFMGSH...F...DRHYCGKCC----
 194 ----KYYKVdE.N..G.KITRLRREC..PseE..CGAG.LFMASH...F...DRQYCGKCC----
 195 -----FYKVdE.N..G.KITRLRREC..PsdD..CGAG.VFMAAH...F...DRQYCGKCC----
 196 -----FYKVdE.N..G.KITRLRREC..PseD..CGAG.VFMAAH...F...DRQYCGKCC----
 197 ----KFYKVdE.N..G.KITRLRREC..PseD..CGAG.VFMAAH...F...DRQYCGKCC----
 198 ---------.-.-..G.KVQKLRKEC..PnaE..CGAG.TFMANH...F...DRHYCGKCGL---
 199 ---LKYYRI.N.D..DgSVKQLRRECpsP..E..CGPG.IFMAWH...H...NRQYCGKCHLT--
 200 ---LKYYKV.E.G..D.KVVRLLKEC..DssT..CGRG.VFMAQH...H...DRDYCGRCGT---
 201 ----KYYKV.DsD..G.KIERLRREC..P..NesCGAG.VFMAAM...Q...DRQYCGRC-----
 202 ---------.-.E..G.KVTKLRRECsnP..T..CGAG.VFLANH...K...DRLYCGKC-----
 203 ----KYYKV.DgD..G.KIERLRREC..PtpD..CGAG.VFMAAM...H...DRQYCGRCH----
 204 ----KYYKV.DsD..G.KIERLRREC..P..NetCGAG.VFMAAM...Q...DRQYCGRCH----
 205 -----FYKVdE.N..G.KIHRLRRECtsE..Q..CGAG.VFMAAM...S...DRHYCGKCSYT--
 206 ----KYYKV.DsD..G.KIERLRREC..P..NetCGAG.VFMAAM...Q...DRQYCGRCH----
 207 ----KYYKV.DeN..G.KISCLHREC..PsdE..CGAG.VFMASH...F...DRHYCGKCC----
 208 -----YYKV.D.Ge.G.TVTKLRKECsnP..T..CGAG.VFLADH...K...TRLYCGKC-----
 209 ----KYYKV.DgD..G.KIERLRREC..PapE..CGAG.VFMAAM...H...NRQYCGKCH----
 210 ----KYYKV.DeN..G.KISCLRREC..PsdE..CGAG.IFMASY...F...DRHYCGKCCLTYY
 211 ---------.-.E..G.KVTKLRRECsnP..T..CGAG.VFLANH...K...DRLYCGKC-----
 212 ----KYYKV.DgD..G.KIERLRREC..PqpE..CGAG.VFMAAM...H...NRQYCGKCH----
 213 ----KYYKV.DsD..G.KIERLRREC..P..NetCGAG.VFMAAM...Q...DRQYCGRCH----
 214 ----KYYKV.DaD..G.KIERLRREC..PsaE..CGAG.VFMAAM...H...NRQYCGKCH----
 215 ---LNYYSV.D.D..G.KIKKLRRES..P..Q..-SPG.SFMAEH...S...DRLTCGKTGLT--
 216 -----YYKV.D.Ne.G.KVERLKREC..PapT..CGSG.VFMANM...K...DRQYCGKC-----
 217 ----KYYKV.DgD..G.KIERLRREC..PtpE..CGAG.VFMAAM...Q...NRQYCGKCH----
 218 ---------.-.N..G.KISRLRQEC..PsdE..CGAG.VFMASH...F...DRHYCGKCLTY--
 219 ----KYYKV.DeN..G.KIHRLRREC..TseT..CGAG.VFMAAH...E...DRHYCGKCH----
 220 ----KYYKV.DgD..G.KIERLRREC..P..NetCGAG.IFMAAM...Q...DRQYCGRCH----
 221 ----KYYKV.DgD..G.KIERLRREC..PspE..CGAG.IFMAAM...H...NRQYCGKCH----
 222 ----KYYKV.DeK..G.KISRLRREC..PsdE..CGAG.VFMASH...F...DRHYCDKCC----
 223 ----KYYKV.DgD..G.KIERLRREC..PspE..CGAG.IFMAAM...Q...NRQYCGKCH----
 224 ----KYYKV.DeN..G.KIHRLRREC..TseT..CGAG.VFMAAH...E...DRHYCGKCH----
 225 ------YDY.K.T..G.TIRLKNKKC..P..R..CGS-.-IMAHH...LkpvERWHCGKCGYTEY
 226 ----KYYKV.DgD..G.KIERLRREC..PspE..CGAG.IFMAAM...H...NRQYCGKCH----
 227 ----KYYKV.DsD..G.KIDRLRREC..P..NetCGAG.VFMAAM...Q...DRQYCGRCH----
 228 ----KYYKV.DgD..G.KIERLRREC..PspE..CGAG.IFMAAM...H...NRQYCGKCH----
 229 ---------.-.-..G.KISRLRREC..PsdE..CGAG.VFMGSH...F...DRHYCGKCC----
 230 -----YYKV.DnD..G.NVERLRREC..PapT..CGAG.IFMANM...K...DRQYCGKC-----
 231 ---------.-.-..-.KVERTRDEC..P..NpvCGAG.VFMAQH...K...DRKYCGKC-----
 232 ----KYYKV.DgD..G.KIERLRREC..PspE..CGAG.IFMAAM...H...NRQYCGKCH----
 233 ---------.-.-..-.KVERTRDEC..P..NpvCGAG.VFMAQH...K...DRKYCGKC-----
 234 ---------.-.E..G.KVTKLRKEC..SnsT..CGAG.IFLANH...K...DRYYCGKC-----
 235 ---LKYYKV.D.Gd.G.NIKRLRREC..PspE..CGAG.IFMSWH...R...NRQYCGKCK----
 236 ---------.-.-..-.KVERTRDEC..P..NpvCGAG.VFMAQH...K...DRKYCGKC-----
 237 -----FYKV.D.DatG.KVTRLRKEC..P..NhdCGAG.TFMANH...F...DRHYCRKC-----
 238 ---------.-.E..G.KVTKLRKEC..SnsT..CGAG.IFLANH...K...DRYYCGKC-----
 239 ----KYYKV.D.Dn.G.KITRQRREC..PsdE..CGAG.AFMANM...F...DRQYCGRCH----
 240 ---------.-.-..-.KVERTRQDC..PhpQ..CGAG.VYMAQH...K...DRQYCGKC-----
 241 ---------.-.-..-.KVERMRQDC..PhpQ..CGAG.VYMAQH...K...DRQYCGKC-----
 242 -----LYKV.DdD..G.KVERLRREC..EseS..CGAG.VFMADM...K...DRQYCGRC-----
 243 -----YYRVdE.N..G.KITRLRREC..P..Y..-EAG.VFMANH...F...DRQYCGKCGAT--
 244 ---------.E.K..G.VFRFKNKLC..P..K..CGSVmAFHKEP...V...PRWHCGKCGYTQF
 245 -----YYKV.D.Ne.G.NVERLRREC..PapT..CGAG.IFMANM...K...DRQYCGKC-----
 246 ---------.-.-..-.-VERTRDEC..P..NpvCGAG.VFMAQH...K...DRKYCGKC-----
 247 ---------.-.K..G.IIKPKNKRC..P..R..CGS-.-FMAHH...LkpvPRWHCGKCGYTIF
 248 ---------.-.-..G.KVTKLRREC..PteT..CGAG.IFLADH...K...TRHYCGKCH----
 249 ----KYYKVdE.N..G.KISRLRQEC..PseE..YGAG.VFMGRH...F...DRHYCGKC-----
 250 -----YYKV.D.Ne.G.NVERLRREC..PapT..CGAG.IFMANM...K...DRQYCGKC-----
 251 ---------.-.-..-.KVERTRQDC..PhpQ..CGAG.VYMAQH...K...DRQYCGKC-----
 252 ----KYYKVdE.N..G.KITRLRREC..Pse-s.CGAG.VFMASH...F...DRQYCGKCC----
 253 ---------.-.K..G.VFRFKNKFC..P..K..CGSVmAFHREP...V...PRWHCGKCGFTQF
 254 ---------.-.-..-.KVERTRQDC..PhpQ..CGAG.VYMAQH...K...DRQYCGKC-----
 255 ---------.-.-..-.KVERMRQDC..PhpQ..CGAG.VYMAQH...K...DRQYCGKC-----
 256 ---------.-.-..-.KVERTRQDC..PhpQ..CGAG.VYMAQH...K...DRQYCGKC-----
 257 ----KYYKVdE.N..G.KISRLRREC..P..NedCGAG.VFLASH...F...DRQYCG-------
 258 ---------.-.K..G.VFRFKNKFC..P..K..CGSVmAYHKEP...V...PRWHCGKCGYTQF
 259 ---------.-.-..-.KVERTRDEC..PnpN..CGAG.VFMAQH...K...GRKYCGKC-----
 260 ---------.-.-..-.KVERTRDEC..PnpN..CGAG.VFMAQH...K...GRKYCGKC-----
 261 -----YYKV.DnD..G.KVERLRREC..Psi-t.CGAG.IFMADM...K...DRQYCGKC-----
 262 -----YYKVdE.N..G.KIHRLRRECtgE..Q..CGAG.VFMAVM...E...DRHYCGKC-----
 263 -----FYKVdE.S..G.KVQRLRKEC..PngE..CGAG.TFMANH...F...DRHYCG-------
 264 ---------.-.-..G.KVERLRKCC..AnkK..CGVA.CFLAQH...K...DRLTCGKC-----
 265 -----FYKVdE.S..G.KVQRLRKEC..PngE..CGAG.TFMANH...F...DRHYCG-------
 266 ----SYYHL.D.Q..N.KITRILKES..P..D..-SPG.CFMANH...F...NRITCGKTGLT--
 267 ----KYYKV.DsD..G.KIERLRREC..Psd-t.CGAG.VFMAAM...Q...DRQYCGRC-----
 268 ---------.-.-..-.----DREQC..P..R..CGD-.TFLGEY...G...DRKHCGKCSYTEF
 269 ----KYYKV.DeN..G.KISSLRREC..PsgE..WGAG.VFMASH...F...DRHYCGKCC----
 270 ---------.E.K..G.VIKLKNRRC..P..R..CGS-.-IMAHH...MkpvERWHCGKCGYTEF
 271 -----YYKV.DnD..G.KVERLRREC..Psi-t.CGAG.IFMADM...K...DRQYCGKC-----
 272 ---------.E.N..G.KIKRVLREC..PaeT..CGAG.VFMAQH...A...NRQYCGKCHS---
 273 ---------.-.K..G.VFRFKNKLC..P..K..CGSVmAFHREP...V...PRWHCGKCGFTQF
 274 ---------.E.N..G.KIKRVLREC..PaeT..CGAG.VFMAQH...A...NRQYCGKCHS---
 275 ---------.-.-..G.VFRFKNKLC..P..K..CGSVmAFHREP...V...PRWHCGKCGFTQF
 276 ------YKVdE.N..G.KIHRLRRECtsE..Q..CGAG.VFMAVM...E...DRHYCGKC-----
 277 ------YKVdE.N..G.KIHRLRRECtgE..Q..CGAG.VFMAVM...E...DRHYCGKC-----
 278 ----KYYKVdE.N..G.KISRLRREC..PsdE..GGAG.VVMGSH...F...DRHYCGKCC----
 279 ------YKVdE.N..G.KIHRLRRECtgE..Q..CGAG.VFMAVM...E...DRHYCGKC-----
 280 -----FYKVgD.D..G.KVFRLKKQC..N..N..CAPG.TLMAAH...F...NRDYCGRCHL---
 281 ------YKVdE.N..G.KIHRLRRECtgE..Q..CGAG.VFMAVM...E...DRHYCGKC-----
 282 ------YKVdE.N..G.KIHRLRRECtgE..Q..CGAG.VFMAVM...E...DRHYCGKCH----
 283 ------YKVdE.N..G.KIHRLRRECtsE..Q..CGAG.VFMAVM...E...DRHYCGKC-----
 284 ------YKVdE.N..G.KIHRLRRECtgE..Q..CGAG.VFMAVM...E...DRHYCGKC-----
 285 ---------.-.-..G.VFRFNKRLC..P..R..CGSVmAYHKEP...V...PRWHCGKCGYTIF
 286 ---------.E.N..G.KIKRVLREC..PaeT..CGAG.VFMAQH...A...NRQYCGKCHS---
 287 ------YKVdE.N..G.KIHRLRRECtgE..Q..CGAG.VFMAVM...E...DRHYCGKCH----
 288 ---------.E.D..G.QVKHTRKECneP..E..CGAS.VFFAIH...Y...DRYHCGKCGI---


       50     
       |     
   1 KKAKKSKS
   2 KKVKKAK-
   3 K-------
   4 K-------
   5 K-------
   6 K-------
   7 K-------
   8 KKAKKSK-
   9 KKNEKTE-
  10 KQP-----
  11 KDQPE---
  12 KKNEKAE-
  13 KKNEKTE-
  14 KKNEKA--
  15 KKNEKT--
  16 K-------
  17 K-------
  18 K-------
  19 K-------
  20 KKNEKT--
  21 KK------
  22 K-------
  23 K-------
  24 K-------
  25 K-------
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  31 K-------
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  34 --------
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