Best Alignments for T0480

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ausB	2.1672e-01	2ausB/T0480-2ausB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2apoB	5.8826e-01	2apoB/T0480-2apoB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.16.1
1rlyA	9.0219e-01	1rlyA/T0480-1rlyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.3.1
2ct7A	1.3795e+00	2ct7A/T0480-2ct7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.44.1.4
1q33A	1.3922e+00	1q33A/T0480-1q33A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.1
2e72A	3.0676e+00	2e72A/T0480-2e72A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o7nA	3.6617e+00	1o7nA/T0480-1o7nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2bmoA	4.1321e+00	2bmoA/T0480-2bmoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1uliA	4.1592e+00	1uliA/T0480-1uliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2gbwA	5.1927e+00	2gbwA/T0480-2gbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ckfA	6.3165e+00	2ckfA/T0480-2ckfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fqtA	6.6254e+00	1fqtA/T0480-1fqtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2qkmB	7.3603e+00	2qkmB/T0480-2qkmB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z02A	7.9547e+00	1z02A/T0480-1z02A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1twfL	8.2946e+00	1twfL/T0480-1twfL-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.9.2
1ltlA	8.7024e+00	1ltlA/T0480-1ltlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.40.4.11
1p91A	9.5890e+00	1p91A/T0480-1p91A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.33
2fiyA	1.1079e+01	2fiyA/T0480-2fiyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.59.1.1
2b1xA	1.1838e+01	2b1xA/T0480-2b1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
3c0dA	1.2064e+01	3c0dA/T0480-3c0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001