Best Alignments for T0480

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ct7A	2.5783e-01	2ct7A/T0480-2ct7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.44.1.4
1vk6A	4.2275e-01	1vk6A/T0480-1vk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.4 d.113.1.4 g.41.14.1
2apoB	5.0605e-01	2apoB/T0480-2apoB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.16.1
2ausB	6.3895e-01	2ausB/T0480-2ausB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e72A	8.0169e-01	2e72A/T0480-2e72A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rlyA	1.6525e+00	1rlyA/T0480-1rlyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.3.1
1dl6A	1.8185e+00	1dl6A/T0480-1dl6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.3.1
1q33A	2.6688e+00	1q33A/T0480-1q33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.1
1twfL	3.8441e+00	1twfL/T0480-1twfL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.9.2
1a7iA	4.1647e+00	1a7iA/T0480-1a7iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.3 g.39.1.3
2bmoA	6.5112e+00	2bmoA/T0480-2bmoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2b1xA	9.4926e+00	2b1xA/T0480-2b1xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2de6A	1.0454e+01	2de6A/T0480-2de6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1x6mA	1.0782e+01	1x6mA/T0480-1x6mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.88.1.4
1jj2Y	1.0884e+01	1jj2Y/T0480-1jj2Y-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.41.8.1
2qtdA	1.1115e+01	2qtdA/T0480-2qtdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z02A	1.2222e+01	1z02A/T0480-1z02A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gbwA	1.2539e+01	2gbwA/T0480-2gbwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ckfA	1.2745e+01	2ckfA/T0480-2ckfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hf1A	1.3849e+01	2hf1A/T0480-2hf1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001