Best Alignments for T0469

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2fi0A	7.2850e-02	2fi0A/T0469-2fi0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.248.1.1
1w9iA	2.1614e+01	1w9iA/T0469-1w9iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u3eM	2.6536e+01	1u3eM/T0469-1u3eM-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.3 d.285.1.1
1w7jA	2.7327e+01	1w7jA/T0469-1w7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.3.1 c.37.1.9
1y6uA	3.3058e+01	1y6uA/T0469-1y6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bkhA	3.3176e+01	2bkhA/T0469-2bkhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fe0A	3.4935e+01	1fe0A/T0469-1fe0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
2v26A	4.2176e+01	2v26A/T0469-2v26A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d5rB	4.4239e+01	2d5rB/T0469-2d5rB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gwfB	4.4401e+01	2gwfB/T0469-2gwfB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cc8A	5.3129e+01	1cc8A/T0469-1cc8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
2qnuA	5.6691e+01	2qnuA/T0469-2qnuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2akaA	6.3730e+01	2akaA/T0469-2akaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ofyA	6.3968e+01	2ofyA/T0469-2ofyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j01U	6.6406e+01	2j01U/T0469-2j01U-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vehA	7.2143e+01	1vehA/T0469-1vehA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.52.8.1
2cs8A	7.4906e+01	2cs8A/T0469-2cs8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b5aA	7.7257e+01	2b5aA/T0469-2b5aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
1mvwA	7.9860e+01	1mvwA/T0469-1mvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	i.15.1.1
2ogbA	8.0438e+01	2ogbA/T0469-2ogbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001