# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.2525	a.248.1.1	133507
1txgA	335	9.029	a.100.1.6,c.2.1.6	112775,112776
2akaA	776	11.97		
2bkhA	814	12.77		
1w9iA	770	15.81		
1e0gA	48	17.46	d.7.1.1	37325
1w7jA	795	17.55	b.34.3.1,c.37.1.9	120688,120689
1fe0A	68	26.23	d.58.17.1	39345
1dlwA	116	27.51	a.1.1.1	14982
2imfA	203	31.25		
2aorA	223	31.47		
2v26A	784	37.45		
1br2A	791	43.73	b.34.3.1,c.37.1.9	24558,32155
1mvwA	840	50.55	i.15.1.1	79523
1y6uA	70	50.69		
1lvk	762	54.24		
1ui8A	638	57.74	b.30.2.1,d.17.2.1,d.17.2.1	99419,99420,99421
2ofyA	86	57.92		
1u55A	188	58.60	d.278.1.1	107677
1yzxA	226	59.48		
2ewtA	71	59.59		
1d0yA	761	59.98	b.34.3.1,c.37.1.9	24581,32178
1pczA	191	60.35	d.129.1.1,d.129.1.1	41292,41293
1wdvA	152	65.28	d.116.1.1	114539
1qupA	222	70.86	b.1.8.1,d.58.17.1	22301,39352
2nrkA	173	73.07		
2au3A	407	74.92		
1cc8A	73	77.59	d.58.17.1	39343
1etxA	98	77.66	a.4.1.12	18978
1na3A	91	82.05	k.38.1.1	85481
2z2mA	168	82.97		
2eqpA	50	84.81		
1z67A	135	86.27	a.259.1.1	124507
2fzpA	144	87.20		
2h26A	291	89.86	b.1.1.2,d.19.1.1	135990,135991