Best Alignments for T0469

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2fi0A	1.3490e-01	2fi0A/T0469-2fi0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.248.1.1
1w9iA	1.1655e+01	1w9iA/T0469-1w9iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u3eM	2.0137e+01	1u3eM/T0469-1u3eM-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.3 d.285.1.1
2v26A	2.6590e+01	2v26A/T0469-2v26A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y6uA	2.8042e+01	1y6uA/T0469-1y6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w7jA	2.8268e+01	1w7jA/T0469-1w7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.3.1 c.37.1.9
2d5rB	2.9050e+01	2d5rB/T0469-2d5rB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fe0A	4.0306e+01	1fe0A/T0469-1fe0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
2gwfB	4.0452e+01	2gwfB/T0469-2gwfB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bkhA	4.0494e+01	2bkhA/T0469-2bkhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j01U	5.3381e+01	2j01U/T0469-2j01U-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qnuA	5.3545e+01	2qnuA/T0469-2qnuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	5.8131e+01	1qw1A/T0469-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z15A	6.3238e+01	2z15A/T0469-2z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nxoA	6.5310e+01	2nxoA/T0469-2nxoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ogiA	6.6677e+01	1ogiA/T0469-1ogiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.2 c.25.1.1
2b5aA	6.8649e+01	2b5aA/T0469-2b5aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
1ae7A	6.9657e+01	1ae7A/T0469-1ae7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.133.1.2
1gbs	7.5514e+01	1gbs/T0469-1gbs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2al3A	7.6448e+01	2al3A/T0469-2al3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001