# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.06559	a.248.1.1	133507
1w9iA	770	3.115		
1w7jA	795	8.195	b.34.3.1,c.37.1.9	120688,120689
2v26A	784	8.291		
2j01U	118	9.151		
2bkhA	814	13.19		
1fe0A	68	16.65	d.58.17.1	39345
1y6uA	70	19.99		
1ogiA	303	21.61	b.43.4.2,c.25.1.1	92914,92915
1u3eM	174	22.20	d.4.1.3,d.285.1.1	107640,107641
2oap1	511	22.81		
2qnuA	226	26.65		
2cvhA	220	27.68		
2qwvA	208	33.95		
2d5rB	116	35.58		
2i1qA	322	38.25	a.60.4.1,c.37.1.11	136984,136985
1jpyA	137	39.82	g.17.1.6	67065
1qw1A	121	46.90		
2d2mC	147	47.24		
1fipA	98	50.35	a.4.1.12	18980
2al3A	90	57.68	d.15.1.2	126957
2bmwA	304	59.01	b.43.4.2,c.25.1.1	128815,128816
2z15A	130	60.55		
2b5aA	77	65.43	a.35.1.3	127882
2gwfB	134	67.20		
2ghjA	118	74.24		
2dklA	85	75.10	a.5.2.1	131555
2amjA	204	77.09		
1k6kA	143	77.36	a.174.1.1	77274
1zupA	315	80.52	c.55.3.11	125681
2nxoA	291	81.03		
1cc8A	73	84.54	d.58.17.1	39343
2imrA	420	85.65		
2gokA	429	86.40