# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.6546	a.248.1.1	133507
1w9iA	770	6.988		
2v26A	784	13.62		
1w7jA	795	21.02	b.34.3.1,c.37.1.9	120688,120689
2bkhA	814	25.32		
1y6uA	70	28.15		
1u3eM	174	32.50	d.4.1.3,d.285.1.1	107640,107641
2d5rB	116	41.31		
1ae7A	119	42.83	a.133.1.2	19553
2al3A	90	58.23	d.15.1.2	126957
1gbs	185	59.27		
2feaA	236	60.13	c.108.1.20	133327
2gwfB	134	60.68		
3c8yA	574	64.61		
2z15A	130	73.52		
2cvhA	220	74.79		
2oap1	511	75.08		
1pq7A	224	75.35	b.47.1.2	95002
2b5aA	77	80.10	a.35.1.3	127882
1jpyA	137	81.38	g.17.1.6	67065
1m1qA	91	82.36	a.138.1.3	74419
1aorA	605	82.86	a.110.1.1,d.152.1.1	19042,41794
1qw1A	121	83.90		
1ogiA	303	83.92	b.43.4.2,c.25.1.1	92914,92915
2uwxA	494	84.00	e.3.1.1	140002