Best Alignments for T0468

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1xyiA	1.9289e+01	1xyiA/T0468-1xyiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bw2A	2.8888e+01	2bw2A/T0468-2bw2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bb8	3.5543e+01	1bb8/T0468-1bb8-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1c8cA	3.8142e+01	1c8cA/T0468-1c8cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
3bduA	4.1876e+01	3bduA/T0468-3bduA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ra2A	5.3121e+01	2ra2A/T0468-2ra2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1azpA	6.6067e+01	1azpA/T0468-1azpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
2z1cA	6.8960e+01	2z1cA/T0468-2z1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uurA	7.2442e+01	2uurA/T0468-2uurA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q2bA	7.6430e+01	2q2bA/T0468-2q2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bb8A	7.6880e+01	1bb8A/T0468-1bb8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.10.1.1
1cdcA	7.7825e+01	1cdcA/T0468-1cdcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
3buuA	8.0986e+01	3buuA/T0468-3buuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1te7A	8.2670e+01	1te7A/T0468-1te7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.7
2j1vA	9.0233e+01	2j1vA/T0468-2j1vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p4uA	9.1344e+01	1p4uA/T0468-1p4uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.10.2
2rb6A	9.4087e+01	2rb6A/T0468-2rb6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pjhA	9.4500e+01	2pjhA/T0468-2pjhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r39A	9.4847e+01	2r39A/T0468-2r39A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vpmA	9.6822e+01	1vpmA/T0468-1vpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.38.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001