# List of top-scoring protein chains for t2k-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1pm1X	180	6.566	b.60.1.1	104189
1z45A	699	8.858	b.30.5.4,c.2.1.2	124427,124428
1bb8	71	9.686		
1v0aA	178	10.75	b.18.1.30	119815
3buuA	229	11.31		
1bhgA	613	15.18	b.1.4.1,b.18.1.5,c.1.8.3	22161,23766,28889
1snzA	344	21.31	b.30.5.4	98930
1b69A	69	23.16	d.10.1.1	37479
2bw2A	140	26.34		
1p4uA	153	26.79	b.1.10.2	87780
1te7A	103	30.83	b.122.1.7	112404
2v1oA	151	32.34		
2rb6A	61	37.84		
1bb8A	71	42.03	d.10.1.1	37478
1adwA	123	43.95	b.6.1.1	22893
1azpA	66	45.75	b.34.13.1	37467
3bduA	62	50.87		
1bf4A	63	51.26	b.34.13.1	37461
2ra2A	64	53.50		
1xyiA	66	57.26		
2uurA	245	59.33		
1bqk	124	61.67		
2e63A	170	68.67		
1y0bA	197	71.39	c.61.1.1	122476
1vpmA	169	72.06	d.38.1.1	113967
2jn0A	61	72.15		
2a7bA	120	72.31	b.1.10.2	126333
1c8cA	64	75.57	b.34.13.1	59084
1iu1A	146	78.93	b.1.10.2	71428
1bdsA	43	79.80	g.9.1.1	44596
1cj3A	392	80.66	c.3.1.2,d.16.1.2	30347,37878
3bjkA	153	82.36		
2inbA	140	83.63		
1mbmA	198	84.53	b.47.1.3	78916
1yliA	153	86.36	d.38.1.1	123651
1kkeA	210	89.82	b.83.1.2,b.21.1.2	68669,68670