# List of top-scoring protein chains for t2k-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1bqk	124	2.580		
1adwA	123	3.206	b.6.1.1	22893
3buuA	229	4.462		
2bw2A	140	8.086		
1pm1X	180	8.512	b.60.1.1	104189
1xyiA	66	12.71		
1azpA	66	18.17	b.34.13.1	37467
2v1oA	151	22.97		
1np1A	184	24.01	b.60.1.1	27155
1sy3A	184	26.01	b.60.1.1	106110
1fbnA	230	38.24	c.66.1.3	34181
3bjkA	153	40.80		
1ckeA	227	42.66	c.37.1.1	31846
1a41A	234	44.57	d.163.1.2	42174
1sg7A	96	48.20	a.239.1.1	118961
1yliA	153	50.03	d.38.1.1	123651
1vkwA	218	50.20	d.90.1.2	108695
2f9hA	129	50.29	b.161.1.1	133162
1h12A	405	51.40	a.102.1.2	83447
1x8qA	184	53.76	b.60.1.1	114966
2oyoA	196	53.98		
1vj0A	380	57.67	b.35.1.2,c.2.1.1	100786,100787
2ahmA	88	61.87	a.8.9.1	126760
1ig6A	107	63.18	a.4.3.1	62364
2pfxA	191	63.44		
1gh8A	89	69.70	d.58.12.1	39309
1v5pA	126	70.31	b.55.1.1	108382
2c60A	111	72.10	d.15.2.2	129966
1ye8A	178	72.16	c.37.1.11	123010
1bbxC	63	78.43	b.34.13.1	37465
1q38A	89	79.53	b.1.2.1	95663
1lmhA	184	80.85	d.167.1.1	74036
1uc7A	125	82.18	c.47.1.1	99163
1ichA	112	84.85	a.77.1.2	71182
2qwoB	92	88.68