Best Alignments for T0468

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1xyiA	1.0578e+01	1xyiA/T0468-1xyiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bw2A	2.0559e+01	2bw2A/T0468-2bw2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bduA	2.1628e+01	3bduA/T0468-3bduA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1c8cA	2.1629e+01	1c8cA/T0468-1c8cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
2ra2A	3.0781e+01	2ra2A/T0468-2ra2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bb8	4.9538e+01	1bb8/T0468-1bb8-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z1cA	5.3263e+01	2z1cA/T0468-2z1cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uurA	5.4711e+01	2uurA/T0468-2uurA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jmcA	5.9209e+01	1jmcA/T0468-1jmcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.40.4.3 b.40.4.3
1r0uA	5.9982e+01	1r0uA/T0468-1r0uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.60.1.5
1jmoA	6.0794e+01	1jmoA/T0468-1jmoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.1.1.1
2r39A	6.1758e+01	2r39A/T0468-2r39A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eisA	6.2338e+01	2eisA/T0468-2eisA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p4uA	6.7147e+01	1p4uA/T0468-1p4uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.10.2
1jsuC	6.9808e+01	1jsuC/T0468-1jsuC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.55.1.1
2aq6A	7.3790e+01	2aq6A/T0468-2aq6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.45.1.1
2e7mA	7.3900e+01	2e7mA/T0468-2e7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q2bA	7.4272e+01	2q2bA/T0468-2q2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2v78A	7.5530e+01	2v78A/T0468-2v78A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dzkA	7.6910e+01	1dzkA/T0468-1dzkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.60.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001