# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1xyiA	66	5.142		
3buuA	229	6.096		
2cxyA	125	11.70		
2ak3A	226	12.15	c.37.1.1,g.41.2.1	31892,45193
2fwtA	125	17.59		
2bw2A	140	20.68		
1wm3A	72	21.35	d.15.1.1	114736
1r0uA	148	23.39	b.60.1.5	96741
2jdiH	146	26.21	a.2.10.1,b.93.1.1	138273,138274
1eu8A	409	28.06	c.94.1.1	59502
2gvhA	288	28.06	d.38.1.1,d.38.1.1	135776,135777
3bduA	62	33.43		
3bmzA	199	37.32		
2q2bA	179	37.98		
1t5hX	504	40.46	e.23.1.1	106449
1ybyA	215	42.05		
2dgmA	466	45.13	c.67.1.6	131508
1c8cA	64	46.14	b.34.13.1	59084
1td4A	115	47.76	b.85.2.1	112389
2v1oA	151	51.68		
2eisA	133	51.97		
2bvlA	543	54.06		
1fs1B	141	54.59	a.157.1.1,d.42.1.1	19252,38664
2pr5A	132	58.77		
2dxnA	274	60.06		
2ra2A	64	60.27		
2coiA	386	63.07		
1fadA	99	64.61	a.77.1.2	18428
1kqqA	139	75.39	a.4.3.1	72885
2ql3A	209	76.81		
1jr2A	286	80.87	c.113.1.1	67111
1bb8	71	81.45		
3bjkA	153	84.14		
1xsvA	113	86.92	a.4.13.3	116003
1wi1A	126	87.63	b.55.1.1	114658
1jyhA	157	87.75	d.60.1.3	71956
2jmhA	119	88.85		
2glwA	92	89.85