Best Alignments for T0468

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1azpA	2.1944e+01	1azpA/T0468-1azpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1bb8	2.2288e+01	1bb8/T0468-1bb8-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cdcA	2.2360e+01	1cdcA/T0468-1cdcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
2j1vA	2.3045e+01	2j1vA/T0468-2j1vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xyiA	2.5911e+01	1xyiA/T0468-1xyiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cfb	3.1308e+01	1cfb/T0468-1cfb-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bw2A	4.4925e+01	2bw2A/T0468-2bw2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1c8cA	4.4949e+01	1c8cA/T0468-1c8cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1i7qB	5.8579e+01	1i7qB/T0468-1i7qB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.16.1
1te7A	5.8706e+01	1te7A/T0468-1te7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.7
2z1cA	6.1111e+01	2z1cA/T0468-2z1cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h41A	6.1128e+01	2h41A/T0468-2h41A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pjhA	6.2055e+01	2pjhA/T0468-2pjhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bb8A	6.5230e+01	1bb8A/T0468-1bb8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.10.1.1
1a64A	6.5883e+01	1a64A/T0468-1a64A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
1tupA	6.8596e+01	1tupA/T0468-1tupA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.2.5.2
1iu1A	7.0915e+01	1iu1A/T0468-1iu1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.10.2
1td4A	7.1266e+01	1td4A/T0468-1td4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.2.1
2a1vA	7.1605e+01	2a1vA/T0468-2a1vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.198.3.1
3tssA	7.3768e+01	3tssA/T0468-3tssA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.40.2.2 d.15.6.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001