# List of top-scoring protein chains for t04-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2a1vA	144	13.56	d.198.3.1	126019
2glwA	92	17.90		
1azpA	66	18.94	b.34.13.1	37467
1xyiA	66	19.08		
1te7A	103	22.11	b.122.1.7	112404
1bb8	71	22.33		
2j1vA	151	35.82		
2cm1A	260	48.80		
2j82A	240	54.45		
1zjaA	557	65.58		
1zo0A	126	70.38	d.108.1.7	125416
2b8wA	328	72.36		
2q2bA	179	77.05		
1x7yA	400	77.68	c.36.1.11	114944
2jfrA	234	84.07		
2b1kA	168	86.23		
1qw9A	502	87.53	b.71.1.2,c.1.8.3	96466,96467
2erfA	209	87.80	b.29.1.4	132287