Best Alignments for T0466

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2pwwA	3.3456e+01	2pwwA/T0466-2pwwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vbuA	3.8403e+01	2vbuA/T0466-2vbuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ygsA	4.7313e+01	1ygsA/T0466-1ygsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.26.1.1
2r5xA	6.9322e+01	2r5xA/T0466-2r5xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2aefA	6.9770e+01	2aefA/T0466-2aefA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x0cA	7.0563e+01	1x0cA/T0466-1x0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1doiA	7.6156e+01	1doiA/T0466-1doiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.4.1
1t6aA	7.9258e+01	1t6aA/T0466-1t6aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.129.8.1
1u34A	8.1068e+01	1u34A/T0466-1u34A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.76.1.1
2audA	8.2936e+01	2audA/T0466-2audA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qkhA	8.4609e+01	2qkhA/T0466-2qkhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bdfA	8.5445e+01	1bdfA/T0466-1bdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.74.3.1 d.181.1.1
2nsfA	8.6619e+01	2nsfA/T0466-2nsfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1molA	9.4553e+01	1molA/T0466-1molA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.1.1
2ns6A	9.6879e+01	2ns6A/T0466-2ns6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a6hA	9.7370e+01	2a6hA/T0466-2a6hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.74.3.1 d.181.1.1
1vctA	9.8199e+01	1vctA/T0466-1vctA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.7.12.1 d.286.1.1
2gigA	9.8232e+01	2gigA/T0466-2gigA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o9uX	9.9278e+01	2o9uX/T0466-2o9uX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.1.1
1bfgA	1.0095e+02	1bfgA/T0466-1bfgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001