Best Alignments for T0466

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1x0cA	9.9740e+00	1x0cA/T0466-1x0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zx8A	2.9392e+01	1zx8A/T0466-1zx8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.62.1.3
2qkhA	3.1344e+01	2qkhA/T0466-2qkhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pwwA	3.8145e+01	2pwwA/T0466-2pwwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3kinB	4.2569e+01	3kinB/T0466-3kinB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2okmA	4.3131e+01	2okmA/T0466-2okmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y12A	4.4785e+01	1y12A/T0466-1y12A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qbeA	4.5871e+01	1qbeA/T0466-1qbeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.85.1.1
1ooyA	4.7963e+01	1ooyA/T0466-1ooyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.124.1.3 c.124.1.2
2kinB	4.9033e+01	2kinB/T0466-2kinB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2imhA	5.6546e+01	2imhA/T0466-2imhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gsjA	5.6761e+01	1gsjA/T0466-1gsjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.73.1.2
2gc1A	5.7656e+01	2gc1A/T0466-2gc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.1.7
2gsjA	6.3297e+01	2gsjA/T0466-2gsjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ujxA	6.3690e+01	1ujxA/T0466-1ujxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.26.1.2
2r5xA	6.4482e+01	2r5xA/T0466-2r5xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eps	6.4538e+01	1eps/T0466-1eps-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ygsA	6.6311e+01	1ygsA/T0466-1ygsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.26.1.1
1gpr	6.6751e+01	1gpr/T0466-1gpr-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rloA	6.7962e+01	1rloA/T0466-1rloA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.108.1.10

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001