Best Alignments for T0466

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2pwwA	2.5863e+01	2pwwA/T0466-2pwwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vbuA	3.0754e+01	2vbuA/T0466-2vbuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2aefA	5.1594e+01	2aefA/T0466-2aefA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1doiA	5.2739e+01	1doiA/T0466-1doiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.4.1
1ygsA	5.5144e+01	1ygsA/T0466-1ygsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.26.1.1
1u34A	5.5274e+01	1u34A/T0466-1u34A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.76.1.1
1vctA	6.2136e+01	1vctA/T0466-1vctA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.7.12.1 d.286.1.1
2r5xA	6.5785e+01	2r5xA/T0466-2r5xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1molA	6.5858e+01	1molA/T0466-1molA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.1.1
1wqgA	6.7889e+01	1wqgA/T0466-1wqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zkoA	6.9368e+01	1zkoA/T0466-1zkoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t6aA	7.1650e+01	1t6aA/T0466-1t6aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.129.8.1
1bdfA	7.1741e+01	1bdfA/T0466-1bdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.74.3.1 d.181.1.1
2rdyA	7.2521e+01	2rdyA/T0466-2rdyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o9uX	7.3877e+01	2o9uX/T0466-2o9uX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.1.1
2audA	7.4366e+01	2audA/T0466-2audA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1atgA	7.5154e+01	1atgA/T0466-1atgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
1iseA	7.7956e+01	1iseA/T0466-1iseA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.67.3.1
2gigA	8.1808e+01	2gigA/T0466-2gigA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hyeA	8.5282e+01	1hyeA/T0466-1hyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.5 d.162.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001