# List of top-scoring protein chains for T0466.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1lmhA	184	18.78	d.167.1.1	74036
1lqwA	183	19.64	d.167.1.1	74210
1lm4A	194	19.65	d.167.1.1	84626
1q1yA	191	19.73	d.167.1.1	104480
2fdbM	164	26.08		
1v61A	132	26.43	b.55.1.1	108389
1rifA	282	34.85	c.37.1.23	97507
2i80A	360	42.21		
2i87A	364	42.95		
2ocaA	510	45.85		
2vjvA	159	54.31		
2a6mA	155	54.47	d.58.57.1	126287
1ogoX	574	59.65	b.133.1.1,b.80.1.10	92925,92926
2ch6A	344	61.66	c.55.1.5,c.55.1.5	130461,130462
2ch5A	347	61.80	c.55.1.5,c.55.1.5	130453,130454
3cbuA	214	66.39		
2dzrA	99	67.61		
1pv4A	419	69.90	a.140.3.1,b.40.4.5,c.37.1.11	88295,88296,88297
2ht1A	433	71.16		
2fy8A	230	72.41	c.2.1.9,d.286.1.1	134345,134346
1qh0A	295	73.41	b.43.4.2,c.25.1.1	68891,68892
2oguA	233	76.75		
2dlcX	394	77.34		
2aefA	234	80.74		
1wf0A	88	85.22	d.58.7.1	114571