# List of top-scoring protein chains for t06-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1x54A	434	9.571		
1ex2A	189	17.41	c.51.4.2	33225
2pwwA	127	23.27		
2o9uX	97	31.46	d.17.1.1	138960
1hyeA	313	32.82	c.2.1.5,d.162.1.1	61400,61401
1bdfA	235	41.04	d.74.3.1,d.181.1.1	39727,42602
1wqgA	185	46.26		
2vbuA	136	50.77		
1iseA	185	50.84	d.67.3.1	90691
2hi1A	330	60.51		
2oasA	436	62.79		
1molA	94	63.63	d.17.1.1	37988
2a6hA	315	67.18	d.74.3.1,d.181.1.1	126260,126261
1ux6A	350	67.56	b.29.1.16,g.75.1.1	100145,100146
1gtkA	313	69.95	c.94.1.1,d.50.2.1	76346,76347
1a70A	97	72.84	d.15.4.1	37678
1p0fA	373	76.22	b.35.1.2,c.2.1.1	87642,87643
2b4lA	268	76.75		
2brfA	110	80.04	b.26.1.2	128996
1frdA	98	84.61	d.15.4.1	37648
2ns6A	185	89.67