Citations (SAM, SAM-T99, HMMs)
10 20 30 40 50 60
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1 MSENQNEKVYDLSFFMPGQTIDAEEVEVPISKRFVDKEGNVVPFIFKAITTDRIDELEKENTT.Y
2 --EKQEEKVYDLSFFMPGQTVEAEEIKVPISKRFVDKKGNVIPFVFKPITTERIDELEKENTT.Y
3 --ENQNEKVYDLSFFMPGQTIDAEEVEVPISKRFVDKEGNVVPFIFKAITTDRIDELEKENTT.Y
4 ------ENVYDLSFFMPGKTIEAEEIKVPISKRFVDKKGNVIPFILKPITTERIDELEKENTT.F
5 --------TFDLSFFMPGQTVEAEEVKVPISKRFVDKKGNVIPFVFKAITTERIDELEKENTT.F
6 ----------GLQAFFAQEAGEAITEKVVVSDRFKDKDGKPVPWEIRSMTEAENEEIRKSATR.K
7 ----------NLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTK.R
8 ----------NLSAFLSQNAIKVDNVKYIASDRFLDEEGKPVEWELKVLSSEEDEVLRRNCTK.R
9 ----------DLNAFLSQNAIKVENRKYVASERFIGEDGKAIEWELKAIDSDRDRQLRKDSTI.R
10 ----------NLTAFFAHNKKQNENIKHAISKKFVDEQGNPIEWEFAPISPERDEELKSESTK.R
11 ----------DLSLFYAQNAEAGIMEEFAVSNRFKTKDGKPVLWKIRCMTEAENEEHRKAATK.K
12 ----------DLNAFLSQNAIKVENRKYVASNRFINEEGKAIEWEIRALSSEEDAAIRKNCPK.R
13 ----------NLTAFFAHNKKQNENIKHAISKKFVDEQGHPIEWEFAPISPERDEELKSESTK.R
14 -----------FNRFMKQNKVQKENTTYPATKSLTDEKGNPLLWSIKPLTTRENDAIREDCTM.D
15 ------------------DFLMDSFEEVEEIEREITIGGKKKKMKFKPISADKGDELRKKCKK.V
16 ------------------DFLMDSFEEVEEIEREITIGGKKKKMKFKPISADKGDELRKKCKK.V
17 ------------------DFLMDSFEEVEEIEREITIGGKKKKLKFKPISADKGDELRKKCKK.I
18 ------------------DFLMDSFEEVEEIEREITIGGKKKKMKFKPISADKGDELRKKCKK.I
19 -----------MQNMSEDDIIDALLGEIEVPTRTVVIQRLGIPIKLKALTGKQISKIRKDNTH.S
20 ---------GGLSAFLAQNAVKPENIRFAASRRFVDEDGKPMLWELRPLMSEEDEALRRRFTR.M
21 -----------ILSMKEEDILAKLMGTYEVPTATVFIERMGIPLTLKGLSEKEISKIRKECTY.N
22 -----------MQNMSEDDVIDALLGEIEVPTRTVVIQRLGIPIKLKALTGKQISKIRKDNTH.S
23 ---SNEELVYDITAFLPGKHEEKVKLERAVSNRFKDKNGNVIKFVFENVTSERLEELRKDCTKrI
24 --MEEKRMGIDMKAFMKPELKDRGTMEFPGIERYKDAKGNVIPFIIKRLSMKEIKEIRNNYKT.K
25 ------------------DFLMDNFEEAEPIERRVSLGGKEKIMKFKPISAATGDEIRRSCRK.T
26 ------------------DFLMDSFEDTQEIEREVTIGGKKKLMRFRPISAEMGDMIRKRNRK.T
27 ----------NVLEMQEEDIIKKLLGEVEVPKAVVVIERIGIPVELKGLNTVEIKKIREKCTS.K
28 -------KDEEILNMTEEDIINRLMEPDEVPEATYFIERLRIPVTLKGLSEKEINKIKRQCTY.T
29 ------------------DFLIDSFEDVEEVEKELEIGGRKRKMRFKAIGATRADEIRRDCRN.V
30 ----------NLQEFLNNHPVDNLTEEIIVSPRFKDADGLPLKFTIKAMTSQEFEEIRKSATE.I
31 ----EELTEEEMIEMSEDDIINKLLEPSDAPERTYAIERLGIQVTLKGLSEREIQRIRKECTV.E
32 -----------LQLFMKKNKKVKENVFYAPTKSLLDENGLPLNWEFRHVSTKEDEDIRESCTM.D
33 -----------VLAMKEEDILAKLLETHDVPTANIQVPRLGIAIDLKGLTEKEISGIREECTT.R
34 -------------------PVKVENKKVIVSNRFKDKDGNLVPFEIRPITQEENKMLIKKYTK.R
35 --KKEATEVKNIVELLLKMDAGKIKMPSMTYKIFCKKVGIELPFECTALEPETFDELQSSGLK.I
36 --------------------------------KEVHLKRFKSPFVIRSIDESLNDTLKKRATI.K
37 ------------------------NVGSPVEEKEVKLERFKSPFKIKSLTADEVSHIRKQATK.R
38 ------------------------NVGSPVEEKEVKLERFKSPFKIKSLTADEVSDLRKQATK.R
39 ------------------------NVGSPVEEKEIKLERFKSPFKIKSLTADEVSELRKQATK.R
40 --------------LLALDAGRLEMPNKEVTLKLGKLGGAKVTFLCKAVSPEKMAKIQDNLIE.I
70 80 90 100 110
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1 KNV....KG.....RG.....RVKE.LDSQRFYARIAVETTVYPTFKAKELREAYKTEDPVEVAK
2 KNI....KG.....RG.....RVKD.LDTQRFYARIAIESTIYPDFRSKELREAYKTADPVEVAK
3 KNV....KG.....RG.....RVKE.LDSQRFYARIAVETTVYPTFKAKELREAYKTEDPVEVAK
4 KNV....KS.....RG.....RVKD.LDSQRFYARIAIESTIYPDFRSKDLREAYKTADPVEVAK
5 KNV....KG.....RG.....RVKD.LDSQRFYARIAIESTIYPDFRSKELREAYSTQDPVEVAK
6 VKS....KN.....GM.....YTTE.TNNELYLAKLAVASVVFPDLKNVELQQSYGTLGAENLLR
7 VKV....IGnn6htGQ.....YTSE.IDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLK
8 VKV....IGnn6ptGQ.....FTSE.IDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLK
9 VPV....LNkk6atGQ.....YTSE.TDFNTYTLKLCVETVVFPDLHDAELQNSYGVMGAEELLT
10 SMImqgkRK.....GQ.....YNTD.FDHFKYQRLLTIESIVYPNLNDKELQDSYGVMGADALLG
11 VKA....KN.....GT.....YLSE.TNSDLYLAKLAVGSVVYPDLKDAELQKSYGTLGAENLLR
12 EPI....LNkk6htGQ.....YNTV.TDYNKYYEELSIACTVFPDLNDSMLQDSYRVMGANQLLK
13 SMImqgkRK.....GQ.....YNTD.FDHFKYQRLLTVESIVYPNLNDKELQDSYNVMGADALLG
14 VPV....TGkp...NM.....FRPK.VNTSKYIAKMICAAVIEPNLNDKELQDSYGVMTPEELLK
15 KLV....KG.....QK.....MI-E.TDQDKFVSNQIIETTIHPDLKNSELQKAWGVMGAEELLN
16 KLV....KG.....QK.....MI-E.TDQDKFVSNQIIETTIYPDLKNSELQKAWGVIGAEELLS
17 TIV....KG.....QK.....-MSE.TDQDKFIANQIIETTVYPDLKNAELQKAWGVMGAEQLLK
18 TIV....KG.....QK.....-MSE.TDQDKFIANQIIETTVYPDLKNAELQKAWGVMGAEQLLK
19 EKV....KG.....SK.....LEKDvFDDENFNADIIEKATVSPNWNNEKLKAALSVSNGKEVIK
20 VQV....PGks...SQ.....FRQE.FDSNGYLAAMAAGCTVFPNLNDKGLQDSYGVMGAEALLK
21 RKS....RG.....GK.....SEDK.LDGNEFDAGLIVAATTNFNWNDSKLLDSAKASDGKQFIR
22 EKV....KG.....SK.....LEKDvFDDENFNAEIIEKATVSPNWNNEKLKAALNVSNGKEVIK
23 PKG....RG.....RQ.....PEEK.FDSDKFQALLALESTVYPKFSSKELLNAYKSPSALEVAK
24 EVY....RD.....KRn14vaVIND.YDGDSAGLEIMVEAFVQPKLDDPELMEYYGVHDRLDMPN
25 TFH....KG.....QR.....LV-E.TDQDAFVAKLIIETTTVPDFKSQELQQSWGVLGAENLLK
26 KLI....KG.....QR.....IM-E.TDQDKYVSDLIIETTTCPDLKNSELQASWGVLGAEELLS
27 RKI....KG.....-V.....AEEK.LNGEEYDAALIIGATTNFDWNNPKLLEKYSLSDGKQFIL
28 RKE....RG.....K-.....RIKE.LDDEEFNAALIEAATVTPNWNDERLLDALKASDGKQVIR
29 KFI....KS.....QK.....IV-E.TDQDKYLEKVIVETTVYPDLKNAELQSNWGVMGAVELLQ
30 RKG....RK.....--.....--VE.FDAQKFNLRAVINHTIVPDFKDAASIQKLGCRTADEYVQ
31 RKH....RG.....NR.....-TKE.LNEEEFNAALIESATIKPNWSDKRLLSSLSLSSGREVIK
32 VQI....TGkp...GA.....YRKK.IDTNAYIAKLVAASCVVPNLNNAELQDSYGVKKPEDLLK
33 RKI....NG.....-K.....IETK.LNNADFDAALIIGATTNFNWNNPKLIEPLKLSDGKAYIR
34 D--....--.....KK.....GQEY.FDRAEYISELTASAVVFPDLTNAELQKAYGVLGASALLQ
35 ENG....SL.....K-.....----.-DLDNFKMKTNIILASCKTFKDKELLKHFKSPTPRELLR
36 KKN....RQ.....GV.....AIPE.FNNDKYIDSLMSACVVTPDLKDAQLQESYRTVGDEAATL
37 VLN....RKt....HR.....YEQE.TDENQFQGLVVAEAVVSPNLNNEKLQTSWGCIAKPEEVL
38 VLN....RKt....HK.....YEQE.TDENQFQDLVVAEAVVSPNLNNEKLQTSWGCIAKPEEVL
39 VLN....RKt....HK.....YEQD.TDENQFQDLVVAEAVVSPNLNNEELQTSWGCIAKPEKVL
40 SKK....GN.....IQ.....GT--.--NMGKNKVLTVMEGCSDTFRNKDLLEHFNAPTPKELIN
120 130 140 150
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1 RVL..SVGGEYANWLNKAIEINGFDDD..LEDLEEAAKNLEHHHHHH
2 RVL..SVGGEYANWLNKAIEINGFEDD..LEDLEEEAK---------
3 RVL..SVGGEYANWLNKAIEINGFDDD..LEDLEEAAK---------
4 RVL..SVGGEYANWLNKAIEINGFEDD..LEDLEEEGKKLVKDGD--
5 RVL..SVGGEYANWLNKAIEINGFEDE..IEDLEEAAK---------
6 RML..L-PGEYANLIEKVQEINGFDKD..IEDLKEEIK---------
7 TML..T-AGEYVNYTVKVNEVNGFDTS..FEDKVEEAK---------
8 TML..T-AGEYVNYTVKVNEVNGFDTT..FEDKVEEAK---------
9 TML..T-PGEYTDLSSEVGEVNGFDRT..FEDKVEEAK---------
10 KML..T-IGEIADASAVAQEVNGYQAE..LEDMVEEIK---------
11 VML..L-PGEYAALIEKVQQINGFDKD..LNELKEEVK---------
12 AML..T-PGEYTEYVQEVLDINGFDNS..FEDKVEEAK---------
13 KML..T-IGEIADASAVAQEVNGYQAE..LEDMVEEIK---------
14 EMV..DDPGEYGDFANFVQQFNGFTTT..MDDKVEEAK---------
15 AMKsrMTDGEYADWSSTVIEINGYDKG..IQELVEEAK---------
16 AMKsrMTDGEYADWSSTVIEINGYDKG..MQELVEEAK---------
17 AMKskMSDGEYMGWGSVVSEINGYDKG..IQELVEEAK---------
18 AMKskMSDGEYMEWGSVVSEINGYDKG..IQELVEEGK---------
19 RRL..L-AGEMDDLINKIFDLSGYNDE..AEDIED------------
20 AML..T-SGESANYFQKAQEVCGF-TP..IEELTEQAK---------
21 KKL..L-AGEISALTDKILELSGFNNE..LEEMED------------
22 RRL..L-AGEMDNLIEQVFDLSGYNDE..AEDIEEIKN---------
23 KVL..SVPGDYMNWISAASEANGFDDE..IDDEAES-----------
24 IIF..PDKDDFKYADDCLMEACGLASK..KNDKETVEEIKKMMSGEG
25 AMKtkMKDGEYATFSNIVSEVNGYDKS..MNDLVEEAK---------
26 AMKskMRDGEFSDWSSIVGEVNGYDKS..VNDLIEEAK---------
27 RKL..L-AGERTNLVNKVLDLSGYNDE..LSDAED------------
28 KKF..L-AGETSAMGDKVLELSGFDNE..LEEIED------------
29 AMKskMTDGEYSSWSNVVSEINGYDKE..LQELIEEAK---------
30 KVL..L-AGEMSTIVSKIQELSGFDVG..MNELIDEAK---------
31 RRL..L-AGEMVALGDKVMELSGFDNE..LEE---------------
32 ELV..DDPGEYQDLFVFIQKYNGFDTS..MEEEVEEAK---------
33 KKL..L-AGEISFLANKVLELSGFNDE..LEEKED------------
34 KML..Y-VGEYAELAQAVQELSGLDTD..INEDIEEVKN--------
35 KML..L-AGEINDLYNKICELNGYSES..NSEKDKRIEE--------
36 KAM..LKIGEYATLMQEIQSLNGFDED..INDLVEESKKRLEDG---
37 KKM..LKVGEYTELSQAIMDLSGLNDDdsSEDLVEEAK---------
38 KKM..LKVGEYTELSQAIMDLSGLNDDdsSEDLVEEAK---------
39 KKM..LKVGEYTELSQAIMDLSGLNDDdsSEDLVEEAK---------
40 KLL..L-AGEIDELYNTINELNGYEQD..EEEEEE------------