# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1w7jB	151	3.794	a.39.1.5	120690
1rypC	244	16.38	d.153.1.4	41934
1z2zA	446	19.01		
2g3mA	693	20.49		
1xsjA	778	23.48	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	115951,115952,115953,115954
2vqeR	88	23.88		
1z5hA	780	24.41		
2qycA	103	29.18		
1thgA	544	31.49	c.69.1.17	34763
3bixA	574	34.06		
2qmjA	870	34.44		
2h7cA	542	40.79	c.69.1.1	136207
2uubR	88	42.21	a.4.8.1	139949
2fe8A	315	46.26		
2f2hA	773	54.66	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	132818,132819,132820,132821
2g0bA	198	59.33		
1exrA	148	68.76	a.39.1.5	17299
2b1kA	168	75.29		
1pxvA	183	79.18	d.3.1.1	95301
2b7aA	293	79.56		
1njgA	250	79.60	c.37.1.20	85785
2fy6A	143	82.25	c.47.1.10	134344
2bceA	585	86.11	c.69.1.1	34625
1p32A	209	87.77	d.25.1.1	38379
3bm1A	183	87.81		
2hq7A	146	89.44	b.45.1.1	136657