# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1w7jB	151	2.604	a.39.1.5	120690
2g3mA	693	9.825		
1z2zA	446	10.04		
1rypC	244	14.00	d.153.1.4	41934
1xsjA	778	19.68	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	115951,115952,115953,115954
2qmjA	870	19.69		
2qycA	103	29.82		
2f2hA	773	35.80	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	132818,132819,132820,132821
3bixA	574	41.28		
2fe8A	315	44.08		
1thgA	544	49.28	c.69.1.17	34763
2g0bA	198	52.04		
2b1kA	168	53.03		
1f5vA	240	54.79	d.90.1.1	40255
2iwrA	178	62.10		
1p32A	209	71.14	d.25.1.1	38379
1qhdA	398	73.52	a.115.1.2,b.19.1.1	63324,63325
1z5hA	780	76.21		
1t3wA	148	76.56	a.236.1.1	112233
1ynuA	473	82.13	c.67.1.4	123762
1pxvA	183	82.24	d.3.1.1	95301
2oibA	301	82.87		
1sxjE	354	84.73	a.80.1.1,c.37.1.20	106089,106090
3cuoA	99	85.00		
1njgA	250	86.53	c.37.1.20	85785
2a19A	175	89.37