# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1w7jB	151	5.749	a.39.1.5	120690
1z2zA	446	16.83		
1rypC	244	17.67	d.153.1.4	41934
2qycA	103	21.97		
2qmjA	870	22.81		
2g3mA	693	30.83		
1xsjA	778	30.91	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	115951,115952,115953,115954
1z5hA	780	42.27		
2g0bA	198	49.32		
3c18A	290	50.22		
1b22A	114	55.52	a.60.4.1	17969
1ynuA	473	55.91	c.67.1.4	123762
1f5vA	240	56.74	d.90.1.1	40255
2f2hA	773	61.31	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	132818,132819,132820,132821
2vqeR	88	67.15		
1t3wA	148	71.26	a.236.1.1	112233
1njgA	250	82.59	c.37.1.20	85785
3cuoA	99	85.11		
1p32A	209	87.32	d.25.1.1	38379
1si7A	369	87.55	d.265.1.4	98883