# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1w7jB	151	4.295	a.39.1.5	120690
1z2zA	446	9.407		
2g3mA	693	11.11		
2qycA	103	13.89		
1xsjA	778	17.91	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	115951,115952,115953,115954
2qmjA	870	19.02		
1rypC	244	21.97	d.153.1.4	41934
3bixA	574	31.28		
1z5hA	780	32.25		
1thgA	544	33.96	c.69.1.17	34763
2vqeR	88	35.46		
2g0bA	198	35.51		
2f2hA	773	36.94	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	132818,132819,132820,132821
2h7cA	542	42.78	c.69.1.1	136207
2uubR	88	53.33	a.4.8.1	139949
2mysB	166	54.97	a.39.1.5	17308
1jf0A	195	61.62	a.39.1.5	62926
1exrA	148	64.42	a.39.1.5	17299
1t3wA	148	66.23	a.236.1.1	112233
3cuoA	99	67.09		
1njgA	250	68.36	c.37.1.20	85785
2o5gA	148	69.25		
2po3A	424	72.87		
1mldA	314	74.78	c.2.1.5,d.162.1.1	30122,42089
2fe8A	315	75.50		
1zroA	602	75.66	a.264.1.1,a.264.1.1	125551,125552
1ub4A	110	77.32	b.34.6.2	88399
1g33A	73	78.63	a.39.1.4	65121
2a19A	175	79.01		
2ovkC	159	87.51		
1od6A	160	87.80	c.26.1.3	86836
2b1kA	168	89.78