Best Alignments for T0465

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1wdcB	2.8774e+01	1wdcB/T0465-1wdcB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
1p3wA	3.7391e+01	1p3wA/T0465-1p3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
1wdcC	3.8918e+01	1wdcC/T0465-1wdcC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
2raqA	4.2183e+01	2raqA/T0465-2raqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p9qC	5.1712e+01	1p9qC/T0465-1p9qC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.5.8.1 d.235.1.2 d.58.11.3
2gv5A	5.3695e+01	2gv5A/T0465-2gv5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2scpA	5.4795e+01	2scpA/T0465-2scpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
2zbtA	5.8016e+01	2zbtA/T0465-2zbtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i8oA	5.9713e+01	1i8oA/T0465-1i8oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
1q98A	6.3587e+01	1q98A/T0465-1q98A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xiyA	6.4777e+01	1xiyA/T0465-1xiyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ukzA	6.4973e+01	1ukzA/T0465-1ukzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbrA	6.5040e+01	2pbrA/T0465-2pbrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a2xA	6.6084e+01	1a2xA/T0465-1a2xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
1jdlA	6.6483e+01	1jdlA/T0465-1jdlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
1lshA	6.6759e+01	1lshA/T0465-1lshA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bwjA	6.6807e+01	2bwjA/T0465-2bwjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gmgA	7.1400e+01	2gmgA/T0465-2gmgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f6uA	7.5630e+01	2f6uA/T0465-2f6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1topA	7.6570e+01	1topA/T0465-1topA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001