# List of top-scoring protein chains for t06-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1p3wA	404	10.34	c.67.1.3	87752
2raqA	97	15.04		
1wdcB	156	16.86	a.39.1.5	17302
1svjA	156	24.69	d.220.1.1	106049
1p9qC	256	34.17	a.5.8.1,d.235.1.2,d.58.11.3	104093,104094,104095
1t95A	240	35.50	a.5.8.1,d.235.1.2,d.58.11.3	106705,106706,106707
2h30A	164	37.67		
2gv5A	161	39.40		
1jdlA	121	43.71	a.3.1.1	66557
2i5tA	188	45.90		
1i8oA	114	46.47	a.3.1.1	61979
1wdcC	156	48.62	a.39.1.5	17317
2gmgA	105	49.55		
1xe7A	203	56.10	b.82.1.16	115213
2zbtA	297	57.41		
2g2kA	170	59.30		
1t6sA	162	59.39	a.4.5.60,a.4.5.60	112271,112272
1kmkA	406	59.42	c.67.1.3	68696
1eexA	554	69.38	c.1.19.3	29650
1s6yA	450	69.84	c.2.1.5,d.162.1.2	105314,105315
2ccmA	191	71.70		
2qr6A	393	72.02		
1w85B	324	76.57	c.36.1.7,c.48.1.2	114336,114337
2o8iA	165	76.88		
1w2lA	99	79.68		
2z99A	219	84.62		
2pibA	216	85.13		
1t3iA	420	87.20	c.67.1.3	106354
2pefA	373	87.85		
1aua	296	88.70		
1f9mA	112	89.13	c.47.1.1	32736
1jfuA	186	89.26	c.47.1.10	62940
2scpA	174	89.38	a.39.1.5	17256
3bpdA	100	89.56		
2etxA	209	89.79