# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1p3wA	404	12.08	c.67.1.3	87752
1wdcB	156	16.82	a.39.1.5	17302
2raqA	97	23.74		
1p9qC	256	27.26	a.5.8.1,d.235.1.2,d.58.11.3	104093,104094,104095
1t95A	240	33.16	a.5.8.1,d.235.1.2,d.58.11.3	106705,106706,106707
1jdlA	121	33.25	a.3.1.1	66557
1aua	296	39.20		
2zbtA	297	39.38		
1i8oA	114	41.59	a.3.1.1	61979
2gv5A	161	41.71		
1s6yA	450	46.27	c.2.1.5,d.162.1.2	105314,105315
2gmgA	105	48.21		
1t6sA	162	48.81	a.4.5.60,a.4.5.60	112271,112272
1auaA	296	49.22	a.5.3.1,c.13.1.1	16290,30882
2h30A	164	49.44		
1kmkA	406	50.03	c.67.1.3	68696
1t3iA	420	50.60	c.67.1.3	106354
1xe7A	203	51.01	b.82.1.16	115213
2g2kA	170	52.53		
2o8iA	165	54.43		
2vlbA	251	62.74		
2scpA	174	63.38	a.39.1.5	17256
2ccmA	191	64.93		
1jfuA	186	65.33	c.47.1.10	62940
1wdcC	156	68.17	a.39.1.5	17317
2qr6A	393	68.83		
1svjA	156	69.24	d.220.1.1	106049
2z99A	219	72.01		
2pefA	373	75.53		
2i5tA	188	78.20		
2z69A	154	79.64		
1w2lA	99	83.85		
1f9mA	112	87.90	c.47.1.1	32736
2qs7A	144	89.59